F Rosa Rubicondior

Friday 17 June 2016

Lessons From Menorca - Religious Intolerance

Statue of Jesus on Menorca's highest point - Monte Toro
As I said in my previous post, Menorca has a lot of history, having a large natural harbour and occupying a strategic location almost midway between the Spanish mainland and Italian Sardinia and relatively close to France.

At the end of the Punic wars between Rome and Carthage, Minorca fell under Roman control. By the fifth century it had acquired a large Jewish population which seems to have coexisted more or less peacefully with the predominantly Christian population. However, this was not to last.

In 415 AD there was a forced conversion of the Jews as related by a bishop Severus in The Letter on the Conversion of the Jews. 540 Jews were forcibly baptised, including many of the leading and most wealthy members of the community. Those that remained were expelled to the centre of the island. The synagogues were burned. However, many Jewish families retained their religion whilst showing an outward appearance of Christianity. These went on to form the persecuted and shunned Xueta community with it's distinct form of non-Catholic Christianity.

Lessons From Menorca - More Dead Gods!

Naveta d'Es Tudons, Menorca. A burial tomb for about 100 bodies between 1200 and 750 BCE. Possibly the oldest roofed building in Europe.
We've just spent a very pleasant few days in Menorca - one of the Spanish Balearic Islands and one of the few places we've visited twice.

Menorca has a very long history of conquest and religious persecution which will be the subject of another blog post; what I want to deal with here is how religions and gods that we know little or nothing of can inspire their believers and shape their cultures, yet they disappear without trace when their last believer dies.

It's a theme I've previously written about in my book, Ten Reasons To Lose Faith: And Why You Are Better Off Without It, and in earlier blog posts such asThe Old Dead Gods of Wiltshire, Old Dead Gods - Lessons From Silbury Hill, Old Dead Gods - Lessons from Cirencester, Gods Come And Go But Truth Remains, etc.

Wednesday 8 June 2016

How Evolution Works - Suffering Saxifrage!

I noticed this saxifrage which has been struggling for about three years to survive on a the patch of gravel which constitutes my front garden and it suddenly dawned on me how neatly it illustrates some aspects of evolution. It shows how a species fits itself into an available niche and how it diversifies as it spreads its range, not necessarily because it changes but because the environment in which it finds itself changes. The genetic information doesn't need to change for the meaning of that information to change because meaning is given to the information by environmental context.

If that idea seems a little obscure, consider the word karutis. It is probably meaningless to the average reader of this blog. Show it to a Latvian speaker however, and the meaning will be obvious - wheelbarrow. Of course, if you showed the word 'wheelbarrow' to a Latvian, it would be as meaningless as 'karutis' is to an English speaker. The information in the words is the same in either language; only the meaning changes with the language environment

Saxifrage is good ground cover for gravel because it can survive in shallow soil and spreads mostly vegetatively by short runners and so forms colonies of what are essentially clones of the parent plant. It can also survive being scuffed and kicked occasionally, which is useful when postmen and others going door to door walk to your neighbours door across your gravel garden as though it's a public footpath. It's there partly for ground cover but also for the pretty red flowers it puts up at the right time of the year.

Tuesday 7 June 2016

Human Evolution and Neanderthal Inbreeding

The Genetic Cost of Neanderthal Introgression - Genetics

According to a paper recently published in GeneticsPDF, interbreeding between modern humans and Neanderthals in Eurasia may have been much more common that the small quantity of Neanderthal DNA in modern non-African peoples suggests. The two populations may even have behaved like a single breeding group, in which Neanderthals were eventually genetically swamped by Homo sapien DNA.

The team led by Kelley Harris, of Stanford University used computer simulation of mutation accumulation during Neanderthal evolution to model how humans were affected by imported neanderthal genes. The simulations used known data on mutation rates and population dynamics of hominids.

Sunday 29 May 2016

Habitable Planets Are Probably Commonplace.

Kepler-62f (Artist's impression).
A planet in the 'habitable zone' of a star located about 1,200 light-years from Earth.

Credit: NASA Ames/JPL-Caltech/T. Pyle
A planet 1,200 light-years away is a good prospect for a habitable world: Researchers combine climate, orbit models to show that Kepler-62f might be able to sustain life -- ScienceDaily.

News that astronomers have identified yet another possibly habitable planet raises a number of questions for religion, especially the Abrahamic religions, and even more so for creationist fundamentalism based on a literal reading of the Bible or Qur'an.

Both these books portray a Universe created especially for Earth-bound human beings and a creator god who has, or wants, a close relationship with these specially-created Earthlings. Both Christianity and Islam insist that their god created humans simply to worship it. The entire Universe is supposedly here for somewhere for humans to live as they worship this creator god.

Human Evolution - Another Piece Of The Jigsaw

35,000 year old female skull found in the Pestera Muierii cave in Romania.
Source: Daily Mail
The mitogenome of a 35,000-year-old Homo sapiens from Europe supports a Palaeolithic back-migration to Africa : Scientific Reports

The basic evolutionary history of Homo sapiens is now so well established that new discoveries are tending to fill in the detail rather than cause existing thinking to be substantially revised. Far from being a 'theory in crisis' as the creation industry would have people believe, Darwin's fundamental principles of evolution are actually being confirmed with each new find and the Theory of Evolution is proving to be the only scientific theory capable of making sense of the entire picture.

We know that H. sapiens evolved in Africa and that there was a subsequent migration out of Africa and into Eurasia on at least one occasion. Everything else is now more or less filling in the details of what happened next and how that migrant population spread, diversified and re-mixed to give the modern Eurasian populations with its present geographical distribution of genes.

Thursday 26 May 2016

Are Theists Afraid of Something?

You know, theists seem a frightened little lot especially when it comes to even basic argument against 'faith'. They seem almost to be afraid you'll read something that makes them feel uncomfortable, as though they think it'll expose the vacuous nonsense they rely on to keep the flock of sheeple together. They'll do almost anything to deter you reading criticism, including abandoning even the basic principles of the 'morality' they claim their 'faith' gives them.

The important thing, so far as a theist is concerned, is keeping you from not thinking about your 'faith' rather than thinking about it and finding it worthless.

Take, for example this ludicrously inaccurate, anonymous 'review' of my book, Ten Reasons To Lose Faith: And Why You Are Better Off Without It.It was almost certainly posted by someone who isn't interested in truth since there is not a word of truth in it.

Recycled banal arguments already refuted by scholars. Don't waste your money on this junk. The book has many errors both in grammar and content. This author uses a fake name and plagiarizes other atheists. This book is poor scholarship and offers nothing new. The conclusions that she comes up with are illogical and based on anecdotal inferences, not logic or reason. Over 90% of the book is meandering and doesn't make any points. The reader will get bored and will realize that this author is an amateur and has no academic credentials.

Monday 23 May 2016

How Evolution Works - Evolving Ichthyosaurs

A large aberrant stem ichthyosauriform indicating early rise and demise of ichthyosauromorphs in the wake of the end-Permian extinction : Scientific Reports

A nice example this week of how a major, possibly the main, driver of evolution is not as creationists pretend science says, random mutation, but environmental change. It also seems to go some way to solving something of a mystery in marine evolution during the period following the end-Permian mass extinction.

The Permian Era came to an abrupt end about 250 million years ago when increased volcanic activity and climate change and led to rising sea levels causing the extinction of ninty-six percent of all marine life. Unlike terrestrial metazoans which radiated rapidly to fill the newly-vacated ecological niches this mass extinction provided, the marine reptiles were thought to have evolved much more slowly.

Monday 16 May 2016

A Whale of a Problem For Creationism!

Hector's beaked whale found at Waitpinga Beach
Photo credit: South Australian Museum
Rare whale found on Australian beach believed to be evolutionary throwback | Science | The Guardian

A problem which creationists have to cope with, normally by simply ignoring or denying the evidence, is the problem of redundant structures and genes. These frequently appear in organisms which do not need them any more and look for all the world like they were once needed in an earlier ancestor. They may even still be present in a related species as evidence of common descent.

One of these is the genes for making egg yolk which are still present in placental mammals - which don't have eggs with yolk in them. In humans we have the wonderful example of wisdom teeth which seem to be there now only to provide work for dentists. They are entirely consistent with the fossil evidence that the human maxilla and mandible have become reduced during evolution but our dentistry hasn't kept up with the changes due to a lack of selection pressure, probably because impacted wisdom teeth tend not to inhibit reproduction very much.

Sac Watch - Doppy Dotus Does It Again!

Manuel de Dios Agosto (aka Sacerdotus and very many other aliases) - one of the least competent Internet beggars and frauds in the business - really does take some beating for sheer stupidity on a quite astonishing scale.

Readers may remember his very long list of Twitter atheists. He spent several days compiling it in a desperate attempt to get people to file false reports on them to get them shut down because they were exposing his scams and refuting his lies, only to discover that he had blundered stupidly into compiling one of the best source lists of atheists to follow. This rapidly became 'Manny's List' which indignant atheists soon began complaining of being omitted from.

Now it seems he did it again in even more spectacular style! This time he's compiled and published a list of blog posts about himself that he doesn't want anyone reading! No, honestly!

Saturday 14 May 2016

Evolving a Loss of Complexity!

Monocercomonoides
First eukaryotes found without a normal cellular power supply | Science | AAAS

One of the problems creationism suffers from, apart from not having any supporting evidence, is that it relies almost entirely on dogma. One such dogma, for example, is that scientists believe evolution is all about life progressing from the simple to the complex and that somehow all evolutionary change must involve an increase in complexity.

Yes, I know this is nonsensical and at odds with the facts, but that's the point of dogma; it means evidence doesn't need to be bothered with because the truth is 'known' by fiat. The dogma says so...

Tuesday 10 May 2016

Carrot Evolution And Creationism

A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution:

Can there be any other group of people who cling to a belief so tenaciously in spite of all the evidence against it as creationists?

I suppose, to be fair, there are climate change deniers, anti-vaxxers, moon landing conspiracy nut-jobs and other associated wack-a-doodle cults, but there can be few who do it with such fanaticism as creationists. There just doesn't appear to be any connection between their fanatically-held beliefs and what the evidence shows to be true. For example, a central dogma of creationsm is that mutaions are

Friday 6 May 2016

Why You Need To Lose Faith

Another excerpt from my book, Ten Reasons To Lose Faith: And Why You Are Better Off Without It,this time explaining why you would be better off without faith and by embracing the doubt and uncertainty that comes from acceptance of evidence as the only basis for making rational decisions.

It is not insignificant that for everyday life, and for any activity where material reality has to be taken into account, the only way to make rational decisions is to behave atheistically. The simple task of crossing a road is the same for an atheist as for a theist, even though a theist might want to mutter a few prayers as well. In the end, it is the physical evidence that the road is safe to cross that determines the appropriate action.

Atheists and theists leaving a sinking ship must go through exactly the same process of getting into a lifeboat even though the theist might spend a moment in prayer. Only the most insane of theist would decline to get in a lifeboat believing a god would be along to save them shortly. In effect, theists crossing a road or theists getting into a lifeboat are behaving just like atheists. Even Christians have a saying, ‘God helps those who help themselves’, to explain why people need to behave like atheists in everyday life. That rather begs the question though of why the Christian god would favour people who behave like atheists.

Wednesday 4 May 2016

A Crisis of Faith

The phenomenon of the 'crisis of faith' is curious. Theology must be the only academic discipline where practitioners regularly have severe doubt about their subject being real. A 'crisis of faith' should more properly called an intrusion of reality, as common sense tries to take over and allow reality in.

The following is an excerpt from my book, Ten Reasons To Lose Faith: And Why You Are Better Off Without It,dealing with this curious phenomenon that seems to be an occupational hazard in clerical circles.

There is probably a very good evolutionary explanation for the tendency to check the evidence before making a life or death decision. Those who did not check had a greatly reduced likelihood of passing on their genes, so the genes for not bothering about evidence would tend to lose out in competition with their counterparts which regarded evidence as important.

So, when it comes to life and death decisions in real life, normal people not only rely on evidence but look for it and regard it as the best available basis for the decision. Importantly, they regard absence of evidence of cars as perfectly reliable evidence of the absence of cars. Why would they not? What would be the purpose of looking for evidence then regarding its presence or absence as evidence of the same thing?

Sunday 1 May 2016

Why Dinosaur-Birds Evolved Beaks

Diet affects the evolution of birds -- ScienceDaily

One of the nicest things about studying biology, and particularly evolutionary biology, is the way it all dovetails neatly into place and fits in with, for example, climate change, geology, etc., to form a complete coherent picture that tells us not only why things are as they appear today but how.

For example, we it take for granted that there will be birds around. The world as we know it would be quite a different world without birds. Flowering trees might not have small berries; humans might not have colour vision because our simian ancestors would not have needed to recognise ripe fruit by the colour change that signals to birds that the fruit is ripe.

Saturday 30 April 2016

Evolution or Sadistic, Idiot Designer?

(A) Two males on a parasitized A. vaga (Osnabrück, 10.ii.2008).
(B) Five males on a parasitized host (Osnabrück, 23.ii.2008).
Photographs © W. Rutkies.
Traumatic insemination and female counter-adaptation in Strepsiptera (Insecta)

Parasitism itself, with it's inevitable arms race as the host evolves to combat the parasite and the parasite evolves to overcome its host's defenses is a major embarrassment to anyone trying to believe in any intelligence behind living things, or even intelligent evolution because, frankly, arms races are not intelligent.

But, even more of an embarrassment to intelligent (sic) design advocates, especially those who unashamedly link it to biblical literalism complete with the Christian god as the magic creator, are the exquisitely nasty mechanism some parasites have evolved. Their sheer malevolent nastiness precludes design by a benevolent designer and cannot possibly be presented as the work of a loving god or anything approaching one.

Friday 29 April 2016

What? No Flood? - Australia's 50,000 Year History

Australian Aborginals have one of the oldest histories of any peoples, dating back 50,000 years.
Photo Credit: Rusty Stewart/Flickr (CC BY-NC-ND 2.0)
Deep Roots for Aboriginal Australian Y Chromosomes: Current Biology

If you are a creationist who insists that Earth is somewhere between 6,000 and 10,000 years old and that everyone save for a single family living in the Middle East were drowned in a global flood about 4,000 years ago, it really doesn't help that you have no evidence for that claim.

Imagine then having to cope with scientists continually coming up with evidence that it couldn't possibly be true! Evidence that modern humans have lived continuously and with little or no contact with other human groups, for 50,000 years in a single continent, for example.

Wednesday 27 April 2016

Pope Francis And The Predatory Priest

Father Joseph Jeyapaul – ABC News
Sexual abuse case: US woman files lawsuit against Indian Bishop

You might think, with all the fanfare of publicity surrounding Pope Francis' 'reforms' of the Catholic Church in view of the tidal wave of child abuse scandals engulfing it, that something might have actually changed.

Well, that was what you were supposed to think, of course, but, as so often with the Catholic Church, what they actually do bears scant relationship to what they say they will do, or what they say others should do. For example, weren't we led to believe that predatory

Another of Those 'Non-existent' Transitional Forms!

Artist's impression of the amphibious ichthyosaur, Cartorhynchus lenticarpus, crawling over dry land
Credit: University of California at Davis.
Photograph: Stefano Broccoli/PA
A basal ichthyosauriform with a short snout from the Lower Triassic of China : Nature : Nature Publishing Group

I'm beginning to wonder if creationists are using a private definition of 'non-existent'; a definition that includes not only existent but lots of examples and evidence of existence. It's one of the weirdest aspects of creationism that relies so heavily on simple, repetitive denial of the evidence and the assertion that what can be clearly seen just isn't there, and yet it is firmly believed by so many people.

Here, for example, is yet another example of one of those transitional fossils that creationist fraud tell their willing dupes almost daily do not exist, even claiming that 'evolutionists' have been searching for years for one and have never found any. To be fair, this one was only reported a little over a year ago, so creationist frauds probably won't have thought up an excuse to dismiss it yet, so won't have mentioned it on one of their disinformation sites.

Tuesday 26 April 2016

Dung Beetles Bury Creationism

Phylogeny of the Oniticellini and Onthophagini dung beetles (Scarabaeidae, Scarabaeinae) from morphological evidence

You might think that dung beetles are not especially interesting but to an entomologist, they are a fascinating and diverse group of beetles, often performing ecologically-essential functions such as burying dung, improving soil nutrient content and even distributing seeds.

However, very many species do not do the classic dung beetle thing of rolling dung into balls and burying in the ground as food for their grubs. Some feed on fungi; some have formed a close association with termites and some even eat dead arthropods such as millipedes.

Now Dr T. Keith Philips, a biologist with Western Kentucky University, Kentucky, USA has worked out that the two main tribes, the onthophagines and oniticellines, which comprise the vast majority of dung beetles, and which are distributed worldwide except for Antarctica, evolved from a single common ancestor.

Abstract
A phylogenetic study was conducted to hypothesize relationships of most of the genera of the Oniticellini and Onthophagini for the first time using morphological characters from a diverse array of external and internal sclerites. The monophyly and sister relationship of both tribes was found using Bayesian and parsimony analyses with heavily to moderately weighted data. An alternative hypothesis based on parsimony analyses of unweighted or slightly weighted data show a paraphyletic Oniticellini without the Onthophagini, although recognition of the subtribe Helictopleurina as a tribe would eliminate non-monophyly.

Of the three Oniticellini subtribes, the Helictopleurina and Drepanocerina are monophyletic. There is no support for the monophyly of the Oniticellina or the Onthophagini subtribe Alloscelina, as currently defined. The genus Liatongus is paraphyletic, while strong support was found for monophyly of the Madagascan genus, Helictopleurus. The genus Onthophagus is never monophyletic in any analysis performed. Two new subtribes are also proposed: Liatongina subtr. n. including the genus Liatongus and Attavicina subtr. n. including the genera Attavicinus and Paroniticellus.

Topological evidence shows that the ancestral oniticellines and onthophagines were all coprophagous with alternative food sources evolving relatively recently. Both myrmecophily and termitophily probably evolved only once in the onthophagines. The phylogenetic analysis supports an African origin for the two tribes, with a relatively early age for the split of the Madagascar helictopleurines from the remaining oniticellines via dispersal. Furthermore, the presence of the oniticellines in the New World is hypothesized to be due to two relatively old dispersal events via Beringia and two relatively recent trans-Atlantic invasions of the Caribbean.


Copyright © The author. Reprinted under terms of Creative Commons Attribution Licence (CC BY 4.0)

The interesting this here is how this group has evolved from a single, coprophagous, African ancestor and spread worldwide, diversifying into non-coprophagous species fairly recently. Divergence and distribution fit neatly into known plate tectonic geology and the entire family tree only makes sense as the result of evolution into different geographical and ecological niches.

Once again, we see a scientific paper by a biologist who seems to be completely unaware that, if creationist claims are correct, evolutionary theory is a theory in crisis and is no longer regarded as valid by a large number of biologists. In fact, curiously, there don't seem to be any serious science papers published by practicing biologists that show any awareness that the theory of evolution is not the best available explanation for biological diversity, morphology, physiology and genetics.

Perhaps one of my creationist readers would like to explain this curious disparity between what can be seen and what they claim...

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