Creationism Refuted - Evolution of Gigantism in British Island Wrens

A St Kilda Wren, Troglodytes troglodytes hirtensis

Photo: Craig Nisbet

A Shetland Wren, Troglodytes troglodytes zetlandicus, Kergord, Mainland, Shetland

Photo credit: Dr Michał Jezierski

New research helps scientists unlock evolution of gigantism in Scottish island wrens - University of Birmingham

Creationists will continually demand evidence for evolution being observed, then, when the evidence is provided, immediately insist that science should adopt their childish parody of evolution, in which one species turns into an unrelated species in a single miraculous event. That is not evolution as any biologist understands it. In fact, if such a thing were ever observed, it would falsify the Theory of Evolution, not confirm it.

By demanding evidence for something no scientist has ever claimed happens, creationists imagine they are somehow refuting science, or at least providing a plausible anti-Darwin argument for people who do not understand the science.

So this example of evolution in living populations will almost inevitably be dismissed by creationists using that same disingenuous tactic. It is evidence for the evolution of island gigantism in isolated populations of the wren, Troglodytes troglodytes, on Scottish islands. And, to rub salt in creationists' wounds, it is not merely a single isolated example, but multiple examples of gigantism evolving in island environments — an example of parallel evolution in response to similar environmental pressures acting on different local populations.

In other words, this is not some local curiosity that can be waved away as a one-off oddity, but the predictable result of isolation, restricted gene flow and similar island conditions acting on related populations. The evidence has just been published, open access, in the Evolutionary Journal of the Linnean Society by researchers led by the University of Birmingham.

The researchers, led by Dr Michał Jezierski, examined four subspecies of island wren, each isolated on a specific Scottish island or archipelago — Shetland, Fair Isle, the Outer Hebrides and St Kilda. Each of these subspecies is geographically isolated, yet exposed to broadly similar island environments, and each differs significantly from the wrens found throughout mainland Britain and continental Europe.

The study showed that the wrens of St Kilda and Shetland show little evidence of interbreeding with the mainland population. These two populations have evolved spectacular island gigantism: a wren from England will typically weigh about 7–10 grams, while a St Kilda wren weighs about 13–16 grams. The largest St Kilda wrens are therefore more than twice the weight of the smallest mainland wrens, and their genetic distinctiveness is so marked that the researchers say they may be on the way to becoming separate species.

Importantly, the genomic evidence shows that the Shetland and St Kilda wrens are genetically distinct from each other, despite having evolved similar enlarged body sizes. In other words, the same broad evolutionary outcome has arisen independently in separate island populations, rather than being inherited from a single already-giant ancestor. That is exactly what evolutionary biology predicts: related populations, isolated in similar environments, can be shaped in similar directions by similar selection pressures, even when the detailed genetic route differs.

Refuting Creationism - How Our Blood Cells Have Evolved From Our Single-Celled Ancestor from 700 Million Years Ago

The origin of blood cells can be traced back approximately 700 million years to when human ancestors were single-celled organisms. When these ancestors evolved into multicellular organisms (animals), macrophages emerged as the first blood cells. Over the course of subsequent evolution, various blood cells, such as mast cells, diversified.

KyotoU / Yosuke Nagahata

The 700-million-year history of our blood cells | EurekAlert!

In a stunning, albeit unwitting, rebuttal of creationist claims, a team of researchers at Kyoto University is due to publish, on 29 May 2026, the results of their investigation into the evolutionary history of animal blood cells in Proceedings of the National Academy of Sciences of the United States of America (PNAS). The paper, entitled "Animals have expanded the evolutionary legacy of unicellular ancestors in blood cells", is unlikely to please those creationists who keep assuring their dupes that biomedical scientists are about to abandon 'Darwinism' and adopt creationism instead.

It will also disappoint those who insist there is no evidence for the evolution of complex multicellular organisms from single-celled ancestors — what they like to caricature as the 'microbes-to-man hypothesis', as though humans, preferably modern Americans, were the preordained end-point of the entire history of life. That, of course, is creationist teleology masquerading as biology: the assumption that evolution must have been aiming at us because Bronze Age religion says humans are the central purpose of creation.

What the Kyoto University team found was not a sudden, magical appearance of blood cells, but a deep evolutionary continuity. They developed a new method for comparing gene-expression profiles across different animal cell lineages and species, and included unicellular organisms in the comparison in order to trace the possible origin of blood cells back to our single-celled animal ancestors.

Among human blood-cell lineages, macrophages showed the closest resemblance to unicellular organisms. This is hardly surprising, since macrophages still behave in a remarkably cell-autonomous way: they move through tissues, detect targets, engulf bacteria, clear dead cells and remove unwanted material — behaviour strongly reminiscent of free-living phagocytic cells.

The team then traced the gene FOS, commonly expressed in blood cells across animal species, back to a single-celled ancestor that lived about 700 million years ago, around the time when the first animals were evolving. The implication is that the earliest animal blood cells did not appear from nowhere. They arose when early multicellular animals repurposed genetic programmes inherited from their unicellular predecessors.

From there, the researchers were able to reconstruct a family tree of blood-cell lineages spanning roughly 700 million years. Their analysis suggests that early blood cells were macrophage-like, that mast cells later branched from that macrophage lineage, and that prototypic T cells and red blood cells subsequently branched from mast cells. Prototypic B cells, meanwhile, appear to have branched from the macrophage lineage after mast cells had already diverged.

In other words, the blood and immune cells circulating in our bodies today are not isolated, specially-created structures with no history. They are modified descendants of ancient cellular systems, inherited, repurposed and diversified during the evolution of animals from unicellular ancestors.

So, far from supporting the creationist claim that there is no evidence for the evolution of complex life from single-celled ancestors, the evidence is literally circulating in our blood. It is also circulating in the blood and immune systems of other animals, carrying with it a molecular and cellular legacy hundreds of millions of years older than the creation myths of the Bronze Age.

And, as usual, the Theory of Evolution provides the only coherent explanation for the observable facts. The research does not point to separate acts of creation, nor to a sudden magical appearance of blood cells fully formed and without ancestry. It shows descent with modification, inherited genetic programmes, divergence of cell lineages, and the repurposing of ancient biological mechanisms — exactly the pattern evolutionary theory predicts, and exactly the pattern creationism cannot explain without special pleading.

Refuting Creationism - Multiple Origins Of The Japanese People

A mask depicting Aterui 'Lord of Tamo', a famous Emishi chief from the ancient Tohoku District in Japan. The Emishi people from north-east Asia have been identified as a possible third main ancestral group in Japan.

© Avalon.red / Alamy Stock Photo

Geographic regions in Japan from which the samples were recruited are described. These regions include the Japan archipelago, commonly known as Hondo, and the Ryukyu archipelago, which is termed as Okinawa in this study.

From: Xiaoxi Liu et al (2024).

DNA study challenges thinking on ancestry of people in Japan | RIKEN

In my previous post, I showed how scientists, unlike creationists, can and do change their minds when the facts change, using the example of revised dates for the repopulation of the post-glacial British Isles. In this post, I will use another example: a recent revision in our understanding of the origins of the population of the Japanese archipelago.

It had long been believed that a two-part model could largely explain modern Japanese people: indigenous Jomon hunter–gatherer–fishers and later migrants from continental East Asia, associated with rice farming and the cultural transformations that followed. However, whole-genome analysis of 3,256 people from across Japan has shown that the picture is more complex.

The new study identified three major ancestral components: Jomon, East Asian, and a north-east Asian component, most strongly represented in north-eastern Japan and possibly connected with the historical Emishi people. The study was conducted by researchers from RIKEN’s Center for Integrative Medical Sciences. RIKEN is Japan’s National Research and Development Agency and its leading national comprehensive research institute. The research was published, open access, in April 2024 in Science Advances.

The fact that the population history of the Japanese archipelago is best explained by multiple ancestral components, regional structure, migration and admixture is, of course, utterly incompatible with the childish creation and global flood genocide of Bible mythology. It is not a history of people magically created without ancestry, followed by a population reset from a single family of flood survivors. It is the history of an evolved species, carrying in its DNA the record of earlier populations, migrations, interbreeding and selection.

Nor was that the only embarrassing finding for creationists. The researchers also identified DNA inherited from archaic humans, including Neanderthals and Denisovans, in modern Japanese genomes. Some of these introgressed segments are medically relevant. For example, a Denisovan-derived region within the NKX6-1 gene is associated with type 2 diabetes and may influence sensitivity to semaglutide, a drug used to treat the condition. The researchers also identified 11 Neanderthal-derived segments associated with conditions including coronary artery disease, prostate cancer, rheumatoid arthritis and four other diseases. By way of comparison, the RIKEN article also notes earlier research showing that a Neanderthal-inherited cluster on chromosome 3, present in roughly half of all South Asians, is linked to a higher risk of respiratory failure and other severe effects of Covid-19.

In other words, the genomes of modern Japanese people, like the genomes of all modern human populations, contain the traces of real ancestry: migration, admixture, archaic introgression, natural selection and inherited vulnerabilities. This is exactly the sort of messy, contingent history that evolution predicts, and exactly the opposite of what creationists need if their mythology is to be treated as real history.

Creationism Refuted - A Common Protist In An Oxford Pond Refutes Common Design

A ciliated protist, Oligohymenophorea, found in an Oxford pond, has a unique genetic code.

The end of genes: routine test reveals unique divergence in genetic code | Earlham Institute

When working as a Senior Medical Research Technician for Oxford University, one of my pleasures on a sunny Summer day was to take a lunch break walking in the University Parks with colleagues, where we could watch first class cricket free, or, more interestingly, explore the ponds and banks of the Cherwell. Little did we know that almost 60 years later, an organism living in one of those ponds would yield up such compelling evidence that life is the result of an evolutionary process, with no evidence of divine intervention.

Creationists often cite the near-universality of the genetic code as evidence of a single designer using the same system for all life. Of course, the more obvious scientific explanation is common ancestry: all living organisms inherited the same basic translation system from a remote common ancestor, with later lineages modifying it in small but revealing ways. But even on creationist terms, the argument is a hostage to fortune, because if the same code supposedly points to the same designer, then differences in that code raise the obvious question: why would the same designer do the job in different ways?

That awkward question is neatly illustrated by research from the Earlham Institute, published in PLOS Genetics. The research concerns a single-celled ciliate, Oligohymenophorea sp. PL0344, found in a pond in Oxford University Parks, which has done something highly unusual with its genetic code. Codons that normally act as full stops in genes have been reassigned so that, instead of telling the cell to stop making a protein, they now code for amino acids.

This is not a trivial detail. The genetic code is the rulebook by which DNA and RNA sequences are translated into proteins. In most organisms, three particular codons act as stop signals, marking the end of a gene’s protein-coding sequence. Altering those signals might be expected to cause chaos, yet here is an organism in which evolution has tinkered with one of biology’s most fundamental systems and produced a viable alternative arrangement.

For creationists, this creates a familiar problem. The genetic code is invoked when it appears convenient to claim common design, but its exceptions are quietly ignored because they point instead to historical contingency, descent with modification, and evolutionary experimentation. Biology is not showing us the work of an omniscient engineer standardising a perfect system; it is showing us inherited systems being modified, repurposed and patched by evolution.

Creationism Refuted - Butterfly Speciation - 180,000 Years Before 'Creation Week'

Top Heliconius elevatus
Left: Heliconius pardalinus   Right: Heliconius melpomene

Heliconius elevatus, a hybrid between Heliconius melpomene and Heliconius pardalinus

New butterfly species created 200,000 years ago by two species interbreeding - News and events, University of York

About 200,000 years ago, in the Amazon rainforest of South America, something happened that creationists claim cannot happen. Not only did it happen long before the world existed according to creationist mythology, but a new species arose without the intervention of a supernatural entity, and without the magical creation of a new species without ancestors.

As reported in the journal Nature, a new species of butterfly, Heliconius elevatus, arose through hybridisation involving the ancestors of two related Heliconius species, Heliconius melpomene and Heliconius pardalinus. Today, all three species coexist in the Amazon rainforest.

But that is not the only problem for creationists who continually demand evidence of a “speciation event”, as though speciation were a single moment involving a single individual, rather than the population-level process explained by the Theory of Evolution. This example shows that speciation can be rapid in evolutionary terms, yet still go completely unnoticed. A single hybrid, even if found, would not be regarded as a new species, but as the product of a chance mating between two related species. It is only if hybridisation produces a population that remains distinct over generations, with its own ecological niche, mating preferences and genetic identity, that taxonomists are justified in recognising it as a new species.

In plants, hybrid speciation often involves polyploidy — a doubling of chromosome number — which can prevent hybrids from breeding with either parent species while allowing them to breed with one another. But Heliconius elevatus is a much rarer example of homoploid hybrid speciation, in which a new species arises without a change in chromosome number. The picture is complicated by the fact that, over time, there has been continuing gene flow from one of the parent lineages, H. pardalinus, which has homogenised about 99% of the genome. However, the remaining small islands of DNA introgressed from H. melpomene control traits that help maintain H. elevatus as a distinct species: colour pattern, wing shape, host plant preference, sex pheromones, mate choice and flight behaviour. It is this distinctive combination of traits that enables the new species to coexist with both parent species rather than being absorbed back into either of them.

Creationism Refuted - How Evolution Works

Mimicry in Butterflies Is Seen here on These Classic “Plates” Showing Four Forms of H. numata, Two Forms of H. melpomene, and the Two Corresponding Mimicking Forms of H. erato.

Source - Repeating Patterns of Mimicry. Meyer A, PLoS Biology, Vol. 4/10/2006, e341 doi:10.1371/journal.pbio.0040341, CC BY 2.5, Link

Evolution has reused the same genes for 120 million years, study shows - News and events, University of York

The great day creationists have been assuring themselves is imminent — and have been doing so for at least half a century — when evolutionary biologists finally announce that they have abandoned the Theory of Evolution because it fails to explain the evidence, seems to recede even further with almost every new research paper. Instead of being replaced by creationism, complete with unproven supernatural entities, magic, “unknowable mysteries” and evidence-free Biblical folklore treated as real history, evolution remains the basic framework within which modern biology makes sense of the evidence, formulates hypotheses and interprets results.

Almost invariably, research that appears at first sight to question some aspect of evolution is doing nothing of the sort. It is refining the details. That is the case with a new paper in PLOS Biology by a team led by scientists at the University of York, the University of Sheffield and the Wellcome Sanger Institute, which suggests that, in some circumstances, evolution may be more predictable than a simple caricature of random mutation filtered by natural selection would lead us to expect.

The team analysed the genomes of seven species of Ithomiini and Heliconius butterflies, together with the day-flying moth Chetone histrio. These lineages diverged between about 1 million and 120 million years ago, yet they have evolved remarkably similar wing colour patterns as members of neotropical mimicry rings. These warning patterns signal to predators that the insects are toxic or distasteful, so different species benefit by converging on similar “do not eat me” designs.

What the researchers found was striking. In several butterfly lineages, similar colour-pattern switches were associated with the same two genes, ivory and optix. More precisely, the important changes were not usually in the protein-coding parts of those genes themselves, but in nearby regulatory regions — the genetic switches that determine when and where those genes are turned on and off during wing development. In other words, natural selection has repeatedly arrived at similar visible results by acting on the same underlying developmental toolkit.

This is not evolution being refuted; it is evolution being understood in greater detail. What looks like simple convergence from the outside turns out, at the genomic level, to be a repeated use of the same limited set of viable routes. Evolution is still contingent, still dependent on mutation, recombination, selection and inheritance, but it is not infinitely free to do anything at all. Developmental systems constrain what variations are available, and those constraints can make some evolutionary outcomes more likely than others.

One particularly awkward aspect for creationists such as Stephen Meyer, who insist that new “information” must be intelligently inserted by some unknown mechanism, is that the study shows how major changes in form and appearance can arise from changes in the regulation and arrangement of existing DNA. In the moth Chetone histrio, colour-pattern variation is associated with a large inversion — a section of DNA flipped in orientation — closely resembling the inversion-based “supergene” architecture seen in one of the co-mimetic butterflies, Heliconius numata. No designer is required; ordinary genomic processes, filtered by selection, are enough.

It is also worth noting the timescale. These same genetic routes appear to have been available to lepidopterans since deep in the Mesozoic, around the time of the dinosaurs. The predators, environments and ecological communities have changed enormously since then, but the evolutionary principle remains the same: when similar selective pressures act on organisms with similar developmental machinery, evolution can repeatedly find similar solutions.

Creationism Refuted - Crabby Creationists Scuttle Off

Some of the true crab species included in the study.

Clockwise from top left: Two photographs of Tuerkayana hirtipes; Cardisoma carnifex (by Tsubasa Inoue); and Ocypode sinensis (by Junya Taniguchi)

European shore crab, Carcinus maenas

By © Hans Hillewaert, CC BY-SA 4.0, Link

Study suggests crabs’ iconic sideways walk evolved from common ancestor | For the press | eLife

Unlike real intelligent design, evolution has no plan, no foresight and no ability to review progress and start again. It is a non-sentient, reactive process, constrained by what already exists, and able to respond to changing conditions only by favouring advantageous variations in the inherited material available to it. The result is that future generations always carry traces of earlier generations — not merely for a few years, but for millions of years.

This simple consequence of descent with modification explains why living organisms can be grouped into clades, and why the descendants of earlier taxa remain members of those taxa. These nested hierarchies are themselves confirmation of the Theory of Evolution because they are exactly what the theory predicts. Conversely, they are evidence against intelligent design, which, if it were real, should show no such inherited constraint, but rather repeated innovation, clean design solutions and optimal responses to environmental change.

For a good example, look no further than the familiar sideways scuttle of a shore crab (Carcinus maenas). This distinctive form of locomotion is characteristic of true crabs, although not universal among them, and a research team led by Associate Professor Yuuki Kawabata of the Graduate School of Integrated Science and Technology, Nagasaki University, Japan, has shown that it probably arose once, in a common ancestor, around 200 million years ago. Their findings have just been published as a Reviewed Preprint in eLife.

Creationism In Crisis - Evolution In Progress As A Familiar Mediterranean Lizard Goes Green

Common wall lizard, Podarcis muralis.
The yellow and orange colour morphs disappeared over time.

Photo: Roberto García Roa

The "Hulk" lizard.

Photo: Roberto García Roa.

“Hulk lizard” knocks out ancient colour palette | Lund University

This lovely example of evolution in progress will no doubt have creationists demanding that science abandon its definition of evolution and adopt their childish “change of kind” parody instead — a caricature which, if it meant one basic type of organism suddenly turning into another, would falsify evolution rather than confirm it.

The example concerns the common wall lizard, Podarcis muralis, a species widespread in the Mediterranean region. For millions of years, populations of this lizard have included three genetically determined throat-colour morphs: white, yellow and orange. These colour forms are not merely superficial differences. They are associated with different strategies for gaining territories, attracting mates and competing with rivals, and their long-term coexistence has been a textbook example of evolutionary balance maintained by natural and social selection.

Now that balance has been disrupted by the spread of a new phenotype: a larger, bright green, aggressive and sexually dominant form, known to science as the green-and-black, white-throated nigriventris phenotype, nicknamed the “Hulk” by the researchers appears to have arisen near Rome several thousand years ago (a mere tick in evolutionary time) and is now spreading through Italy.

As this form spreads through the landscape, the yellow- and orange-throated morphs are disappearing, leaving the white-throated form behind. The change has been so rapid that, had it involved a marked alteration in a structure likely to fossilise, such as teeth or bones, it would appear in the fossil record of the future as a sudden change after a long period of stasis — in other words, exactly the kind of pattern described by punctuated equilibrium. It is, of course, classic evolution: allele frequencies in populations shifting as a newly successful phenotype spreads.

This evolutionary change in progress is the subject of a paper in Science by an international team of researchers led by Professor Tobias Uller of Lund University, Sweden. The team analysed colour data from about 240 populations of P. muralis, comprising more than 10,000 individuals. The results show that the newcomer has significantly altered the long-standing balance within the species, eliminating the yellow and orange morphs as the larger, more aggressive form spreads through the region.

Creationism Refuted - The Complex Origins of Modern Humans Revealed - No Magic Required

AI-generated image (ChatGPT 5.4 Thinking)

View of the village of Kuboes, on the border of South Africa and Namibia. DNA samples were collected from Nama individuals who have historically lived in the region.

Brenna Henn/UC Davis.

New UC Davis Research Using DNA Changes Origin of Human Species | College of Biological Sciences

Research first published in Nature in 2023 shows just how wide of the mark the Bronze Age authors of the Bible’s origin myths were when they guessed at human origins. Of course, in the absence of any knowledge or understanding of the true age of Earth, the history of life on it, or the existence of deep human ancestry, their guesses were no better than we would expect from people trying to explain the world with folklore rather than evidence.

In fact, as the evidence in the 2023 paper by a team co-led by Professor Brenna Henn of the University of California, Davis, and Simon Gravel of McGill University, Montreal, Quebec, Canada, shows, modern humans did not emerge from a single founding couple, or even from one simple, isolated ancestral population. Instead, our origins lie in a complex, dynamic network of human groups that diversified within Africa, evolved in partial isolation, and later exchanged genes as populations moved and merged.

In that respect, human evolution resembles other cases in nature where populations diverge, remain partly distinct, and yet continue to exchange genes — such as the carrion crow/hooded crow Corvus complex, the Eurasian complex of the great tit (Parus major) and its related forms, and the circumpolar herring gull/lesser black-backed gull Larus complex. These examples show evolution not as a neat ladder or a set of separately created “kinds”, but as a branching, reticulating process in which boundaries can be blurred by gene flow.

This process of diversification and later remixing continued in Eurasia, where Homo sapiens interbred with Neanderthals, Denisovans and, possibly, other human populations. Neanderthals eventually disappeared as a distinct population, or were partly absorbed into expanding Homo sapiens populations, around 40,000 years ago.

Far from the single ancestral couple that may have seemed intuitive to parochial Bronze Age pastoralists, modern humanity emerged from a population history that looks less like a single line of descent and more like a tangled bush with cross-linking branches.

The researchers reached this conclusion by analysing DNA sequenced from saliva samples from 44 modern Nama individuals from southern Africa, an Indigenous population known to carry exceptionally high levels of genetic diversity compared with many other modern groups. From that genetic data, the team developed a model suggesting that the earliest detectable split among ancestral human populations occurred between 120,000 and 135,000 years ago, after two or more weakly differentiated Homo populations had already been interbreeding for hundreds of thousands of years.

Even after that split, migration continued between the populations, producing what the researchers describe as a “weakly structured stem” for modern human origins in Africa. Rather than a single stem from which humanity simply sprouted, human evolution is better understood as a reticulated process: branching, merging, and branching again.

Creationism Refuted - 'Doggerland' Was Lush Forest - Over 6,000 Years Before 'Creation Week'

Southern Doggerland, 16,000 years ago

AI-generated image (ChatGPT 5.4 Thinking)

Southern 'Doggerland' 16,000 years ago.

AI-generated image (ChatGPT 5.4 Thinking).

Warwick Study: Ancient Forests Under North Sea Lost World

More than 16,000 years ago, long before, according to their favourite Bronze Age mythology, creationists' little god created a small flat Earth under a dome centred on the Middle East, people and animals were able to walk from continental Europe into what are now the British Isles. They did so not by walking on water, but across dry land now submerged beneath the North Sea, of which Dogger Bank is one surviving remnant. From this lost landscape, Ice Age fossils such as mammoth teeth and tusks are still regularly dredged up in trawlers' nets.

Whatever hominins left the famous footprints at Happisburgh, Norfolk, almost certainly reached Britain on foot from western Europe, as did, much later, the hominins represented at Swanscombe in Kent and Pontnewydd Cave in Denbighshire, Wales.

Now, evidence presented in Proceedings of the National Academy of Sciences (PNAS) by a team led by Professor Robin G. Allaby of Warwick University's School of Life Sciences shows that southern Doggerland was not a bleak, barren wasteland but supported temperate woodland more than 16,000 years ago. The team reached this conclusion from a detailed analysis of 252 sediment samples from 41 marine cores taken along the prehistoric Southern River in southern Doggerland, where exceptionally well-preserved deposits preserve an environmental record from the Late Pleistocene into the Holocene.

For creationists, the problem is not merely the age of this drowned landscape, awkward though that is for biblical chronology. It is the existence of the evidence itself: well-preserved, datable layers laid down over vast spans of time, preserving a coherent ecological history that can be tested, checked and verified. If biblical mythology were true, those layers should not exist in anything like this form. But they do, and they tell a story utterly at odds with Genesis.

In science, evidence that contradicts a hypothesis counts against it. A theory that repeatedly fails is supposed to be revised or abandoned. Creationism works the other way round. Evidence against it is treated not as a reason to change one's mind, but as a test of faith. By that twisted logic, the more decisively reality refutes it, the more convinced its followers become that they must be right. That is not intellectual strength. It is simply a refusal to let evidence matter.

An interesting aspect to this work, and one that may upset creationists, is the fact that the team used two different, unrelated methods for dating - carbon dating and optically stimulated luminescence (OSL) dating which converged on the same dates.

Refuting Creationism - More on the Domestication of Dogs - Long Before 'Creation Week'

Artist’s impression of a human and their canine companion near a settlement in Ice Age Switzerland.

Credit: Oliver Uberti, Nature.

Cover picture for The Way of the Wolf: A Stone Age Epic

Canine companions: revealing the genetic history of our first friends | Crick

This is the second of my posts on the domestication of dogs and on why the facts are so awkward for creationists. It concerns research by a team led by Anders Bergström and Pontus Skoglund of the Francis Crick Institute, London, working with colleagues from the Max Planck Institute for Evolutionary Anthropology and a large international network of collaborators.

The team have shown that the domestication of dogs had already begun well before the invention of farming, when humans in Europe still lived in nomadic bands of hunter-gatherers. At that stage, dogs would have been hunting companions, sentinel guards for encampments, and perhaps even family pets, long before they were adapted for the many tasks later associated with farming, such as herding livestock and guarding flocks. Their findings are published in Nature.

This establishes dogs as the first domestic animals and suggests that the human-dog relationship may have helped lay the groundwork for later animal husbandry and selective breeding.

The story of the domestication of dogs from wolves is something in which I have long taken a special interest, and it was that interest which led me to write two books with fictionalised accounts of how it may have happened - The Girl and the Wolf and its sequel, The Way of the Wolf: A Stone Age Epic.

Biologically, of course, this evolved symbiotic relationship between two species is exactly the sort of outcome the Theory of Evolution leads us to expect. But, embarrassingly for creationists, it also tells a story rooted in deep time, for which creationism has no credible explanation. Worse still for biblical literalists, it makes a mockery of the claim that God created all animals for the benefit of humankind, because that claim presupposes that animals created by an omniscient, omnipotent designer would already be fit for purpose and would not need extensive modification by human selective breeding.

The researchers reached their conclusions by analysing DNA from 216 canid skeletal remains, including 181 pre-Neolithic samples - that is, from before approximately 10,000 years ago. These remains came from sites across Europe and nearby regions, including Switzerland, Germany, Belgium, the Netherlands, Turkey, Sweden, Denmark and Scotland.

Creationists previously had a little wriggle room when the earliest indisputable domestic dog was thought to date to about 10,900 years ago. They could at least pretend that dogs appeared during their imaginary ‘Creation Week’ or shortly afterwards. That pretence is now no longer sustainable. This study shows that the ancestry of later dogs was already established before 14,200 years ago, and probably earlier still.

Creationism Refuted - Earliest Domestic Dogs - 6,000 Years Before 'Creation Week'

Cover picture for The Girl and the Wolf

Oldest genetic evidence for domestic dogs identified in Europe and Türkiye | University of Oxford

Artistic reconstruction of Pınarbaşı c. 15,800 years ago based on evidence from archaeological excavations by University of Liverpool.

(c) Kathryn Killackey

This is the first of two blog posts on a pair of recent papers published in Nature on the earliest known domestic dogs and what they tell us about when grey wolves first entered into a domestic relationship with humans. Together, these studies push the earliest firm genetic evidence for dogs back[1] about 10,900 years ago, showing that dog populations were already present in western Eurasia during the Late Upper Palaeolithic. For creationists committed to a young Earth and to the simplistic Bronze Age origin myths of the Bible, that is yet another awkward fact: dogs were already on their way to becoming humanity’s first domestic animal long before their preferred chronology even allows for the Earth to exist. [1.1]

Since then, of course, dogs have been systematically modified by selective breeding to suit the many roles humans have found for them. That alone sits uneasily with the claim that a perfect creator made all animals ready-made for human benefit. But what makes these papers especially interesting to me is not only that they create yet another problem for creationist superstition, but that they touch directly on the background to two novels I have recently published, in which the domestication of wolves forms part of the story.

The first of these books, The Girl and the Wolf, tells the story of Almora, a child of the Drognai clan, who is raised alongside a wolf cub, Sharma, who becomes her inseparable companion. When Almora meets one of the last Neanderthals, Tanu, and they fall in love, Sharma plays a crucial part in bringing them together. The kindness of Almora’s mother, Shana, in rescuing and raising the starving cub becomes the small act from which a much larger change in human history begins.

In the sequel, The Way of The Wolf: A Stone Age Epic, Almora and Sharma have become the stuff of legend, their story spreading far beyond the lands of the Drognai. When Almora’s daughter, Shana — herself of mixed Neanderthal and modern human ancestry — chooses to leave the clan because of the tensions her family’s presence has caused, Almora, Tanu and a small band of Drognai go with her to a distant land. There they discover a people who have taken the legend of Almora and Sharma to heart and formed a close relationship with a pack of tame wolves, a relationship that has helped carry them through hardship into a period of hunting success and prosperity.

These books are fiction, of course, because we cannot know exactly how wolves became domesticated. What we can say is that the current evidence points to a long and complex process rather than a single moment of “invention”. The broad consensus is that some wolves probably began by exploiting scraps around human camps, while humans gradually came to recognise their value as sentinels, scavengers and hunting partners. The rest, as they say, is history.

And according to the first of these two new papers, that history was already under way deep in the Late Ice Age. One study generated nuclear and mitochondrial genomes from canid remains from Pınarbaşı in Türkiye, dated to 15,800 years ago, and from Gough’s Cave in Somerset, dated to 14,300 years ago, and concluded that a genetically homogeneous dog population was already widely distributed across Europe and Anatolia by at least 14,300 years ago. The second study analysed 216 canid remains from Europe and found its oldest dog genome in a 14,200-year-old specimen from Kesslerloch in Switzerland, showing that European dogs were already genetically distinct by then. [1.1]

Refuting Creationism - How Humans Caused 'Warrior' Wheat to Evolve.

Early farming unintentionally bred highly competitive "warrior" wheat, study finds | Biosciences | The University of Sheffield

One of the more embarrassing questions you can ask a creationist is this: if an omniscient, perfect god created all living things for the benefit of humankind, as the biblical creation myth claims, why have humans had to modify almost all our domesticated animals and cultivated crops to make them fit for purpose? In many cases, we have altered them so extensively that they are barely recognisable as the same species as their wild ancestors.

The story of how humans domesticated wild species and gradually modified them is, in effect, a textbook example of evolution in progress. Sometimes this happened through conscious selective breeding, but often it was an unintended consequence of domestication itself. Wheat, for example, evolved grains that were more firmly attached to the stalk. This meant fewer grains were lost when harvested and carried back to camp for communal use, so the plants whose seeds stayed attached were more likely to have those seeds planted again, whether deliberately or accidentally, around early hunter-gatherer encampments.

Another example in wheat is the evolution of taller plants with more upright leaves. As humans began planting wheat more densely, they created an environment in which the more aggressive plants literally overshadowed their neighbours and captured a greater share of the sunlight. In this struggle for existence, the plants best suited to the human-made environment were the ones most likely to survive and become the parents of the next generation.

That is the conclusion of a research group led by Dr Yixiang Shan and Professor Colin Osborne of the University of Sheffield, working in collaboration with colleagues from the Autonomous University of Madrid, Rey Juan Carlos University in Spain, and Wageningen University in the Netherlands. Their findings are published in Current Biology.

Malevolent Design - How Epigenetics Helps Pancreatic Cancer To Spread

Representation of KLF5 expression patterns in lab-grown human pancreatic cancer cells (left) and their patterns of migration from the primary tumor (right). Credit: Andrew Feinberg laboratory, Johns Hopkins Medicine. Originally published in Molecular Cancer.

Growth of Spreading Pancreatic Cancer Fueled By “Under-Appreciated” Epigenetic Changes | Johns Hopkins Medicine

A new paper in Molecular Cancer from Johns Hopkins Medicine describes yet another discovery that should be deeply uncomfortable for Intelligent Design creationists. The researchers found that the spread of pancreatic cancer is driven not chiefly by fresh mutations in DNA sequence, but by epigenetic reprogramming — changes in chromatin organisation and gene activity. In particular, they identified KLF5 as a major driver of metastatic growth, with higher expression in most metastatic lesions than in the matched primary tumours. The paper in Molecular Cancer shows that KLF5 promotes metastatic proliferation through epigenetic modifier genes including NCAPD2 and MTHFD1, helping switch on programmes involved in migration, plasticity and invasion. [1]

What makes this especially important is that epigenetics is not some magical extra layer of “specified information” inserted into life by a supernatural designer. Its roots are ancient. In bacteria, DNA methylation is a major form of epigenetic regulation, involved in gene expression, chromosome replication and DNA repair. In archaea, histone-based chromatin already exists in a form strikingly similar to that of eukaryotes, and studies show that chromatin architecture and its role in regulating gene expression long predate complex multicellular life. In other words, the basic machinery was already there in simpler organisms, doing ordinary cellular housekeeping long before animals and plants ever appeared. [2]

Multicellular organisms did not receive a brand-new control system from an intelligent agent; they inherited this ancient molecular toolkit and elaborated it. As multicellularity evolved, epigenetic regulation expanded and became central to cell differentiation, allowing cells with the same DNA to adopt different stable identities by opening some regions of the genome and closing others. Work on the transition from unicellular to multicellular states in Dictyostelium, for example, shows that chromatin reorganisation and histone modifications are closely tied to the shift into multicellularity, while evolutionary reviews note that epigenetic diversity expanded rapidly with multicellular life and that epigenetic marks are crucial in development and long-lived cell lineages. [3]

And that is exactly why this Johns Hopkins work is such bad news for ID creationists. The same ancient, repurposed system that multicellular organisms rely on for cell specialisation can also be subverted to drive one of the deadliest features of cancer: metastasis. That is what evolved systems do. They are modified from older parts, good enough to work, but never perfect and never immune to catastrophic failure. What this study reveals is not elegant, flawless engineering, but the vulnerability of a historically evolved regulatory system — one that natural selection adapted for development and tissue specialisation, but which disease can hijack with lethal consequences. That is entirely consistent with evolution, and profoundly at odds with the notion of a competent, benevolent designer. [1]

Refuting Creationism - Origin Of Western Europeans - Thousand Of Years Before The Mythical Flood

The Hunter-gatherer life-style persisted in Netherlands and Belgium until about 2,500 BCE

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Map indicating hunter-gatherer ancestry proportions across Europe 4500–2500 BCE. Darker is more.

New research into ancient DNA sheds light on key phase in European prehistory - University of Huddersfield

This second post on discoveries made by international teams of palaeontologists and geneticists, including scientists from the University of Huddersfield’s Archaeogenetics Research Group, examines the genetic evidence for the ancestry of modern western Europeans. As so often happens in research into human origins and archaeology, the findings are not what creationists keep hoping for: not a scrap of evidence that the creation myths in the Bible contain even a grain of historical truth. Instead, the team’s findings, published in Nature, add yet more evidence for a deep, complex and thoroughly non-biblical human past.

As usual, the evidence sits squarely at odds with those childish fairy tales of magical creation and a recent global population reset caused by a genocidal flood. The study shows that farming practices were reaching parts of western Europe long before biblical chronology allows for such events, and that there is no sign of the extreme genetic bottleneck such a story would require. On the contrary, both the archaeological and genetic evidence point to continuity across the period, with farming introduced unevenly into the region and with women of Early European Farmer ancestry from the Near East marrying into local hunter-gatherer communities.

Nor are these findings any comfort to far-right white supremacists who fantasise about Europeans as some sort of ancient “pure race”. Research led by scientists including Dr Maria Pala, Professor Martin B. Richards and Dr Ceiridwen J. Edwards of the University of Huddersfield shows that modern Europeans carry ancestry from multiple distinct populations: indigenous hunter-gatherers, Neolithic farmers ultimately derived from the Near East, and later pastoralist groups associated with the Eurasian steppe. In other words, the population history of Europe is one of movement, mixture and cultural exchange, not racial purity.

The team also found that the hunter-gatherer way of life persisted in what are now Belgium and the Netherlands for thousands of years longer than in most other parts of Europe. Rather than being rapidly replaced, these communities retained high levels of hunter-gatherer ancestry well into the Neolithic, apparently because the wetland, riverine and coastal environments allowed them to adopt some farming practices without abandoning their existing lifeways.

Refuting Creationism - Modern Humans Reached Australia 50,000 Years Before 'Creation Week'

AI-Generated imaginative reconstruction of first humans arriving in Sahul

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The migration of the first settlers to Sahul 60,000 years ago.

Photo: Helen Farr and Erich Fisher.

New genetic research supports “long chronology” for first settlement of Sahul - University of Huddersfield

Two recent papers by teams that included members of the Archaeogenetics Research Group at the University of Huddersfield, UK, show how modern DNA extraction and sequencing techniques are adding yet another independent line of evidence in support of the Theory of Evolution and against creationism. Together, they reveal the ancient and complex origins of modern humans, in stark contradiction to the simplistic Bronze Age origin myths of the Bible.

The first of these papers, published last November (2025), and available open access in Science Advances, examines human migration into Australia and lends support to the ‘long chronology’ hypothesis for the earliest settlement of Sahul, the Ice Age landmass that united Australia, New Guinea and nearby islands.

The second paper examines the more recent population history of Western Europe. That will be the subject of my next blog post.

According to the long chronology hypothesis, humans first reached Sahul around 60,000 years ago, whereas the short chronology hypothesis places their arrival between about 45,000 and 50,000 years ago. Either date is, of course, utterly incompatible with the childish notion of magical creation just 6,000-10,000 years ago. And unlike geochronological dating methods, which creationists routinely dismiss as fraudulent, flawed or unreliable whenever the results embarrass them, this evidence comes from genetic analysis of mitochondrial DNA (mtDNA). Because mtDNA is inherited through the female line, it can be used to reconstruct maternal ancestry in remarkable detail.

Refuting Creationism - How New Genetic Information Can Arise Rapidly, Naturally

Lake Malawi cichlids

Source: Wikipedia

A small selection of Lake Malawi cichlids

How ‘supergenes’ help fish evolve into new species | University of Cambridge

Creationists like William A. Dembski constantly reassure their fellow believers that new genetic information cannot arise naturally and therefore requires divine intervention. This claim depends on a misrepresentation of the laws of thermodynamics and a deliberate confusion of information with energy. It is clung to despite the obvious and overwhelming evidence to the contrary, with the same tenacity that creationists bring to their insistence that evolution either does not happen at all or, if it does, must somehow have occurred at an impossibly rapid rate after the Flood to produce such enormous variation within their invented ‘kinds’ from just a single surviving pair.

So now we have yet more contrary evidence for creationists to ignore, this time in the form of an explanation for how the cichlid fishes of Lake Malawi in East Africa were able to evolve into more than 800 species in a fraction of the time it took humans and chimpanzees to diverge from a common ancestor. Readers of this blog with long memories may recall that, back in 2012, I described these fish as a particularly powerful argument against creationism.

The fact of this rapid adaptive radiation, taking place on a timescale that could be independently verified, was already indisputable. What we lacked at the time was a clear understanding of the underlying mechanism that made it possible. That gap has now been filled by researchers from the Universities of Cambridge and Antwerp, who have shown that the source of this new genetic information lies in genetic inversions, where an entire section of DNA is inserted in reverse orientation. They have recently published their findings in the journal Science.

During the normal process of meiosis, in which reproductive cells are formed, crossing-over reshuffles genes to produce new combinations in offspring. But when a segment of DNA has been inverted, that section cannot take part properly in the crossing-over process. As a result, the genes within it remain linked together as an intact block, forming what geneticists call a ‘supergene’. These supergenes can then be inherited largely unchanged across generations. The effect is to create barriers to hybridisation much more quickly than would otherwise be possible, effectively isolating a new gene pool within the wider population and allowing new species to evolve far more rapidly than usual, instead of having novel gene combinations continually diluted by interbreeding across the whole population.

Creationism Refuted - 100 Million Years Of Cuttlefish and Squid Evolution

Top Left: Pygmy squid. Idiosepius sp.
Photo by Keishu Asada
Bottom left: Ram’s horn squid, Spirula spirula. Photo by Dr. Victor Tuset

Top right: Ryukyuan bobtail squid, Euprymna brenneri Photo : Jeff Jolly
Bottom right: Common cuttlefish, Sepia sp.
Photo by Keishu Asada

The intricate ram’s horn squid shell is only about the size of a fingernail. Compared to other cephalopod species, the shell structure has not degraded over time. As part of this study, researchers used transcriptomics which revealed genes supporting biomineralization and regeneration of the shell.

Credit: Catherine Hodges/OIST

100 million years ago, an ‘evolutionary fuse’ was lit in the deep ocean, sparking squid diversification | EurekAlert!

Another day, another gap in evolutionary history closed by scientists doing what scientists do: following the evidence wherever it leads. This time, the gap concerns the origins and diversification of squid and cuttlefish, the decapodiform cephalopods.

An international team led by the Okinawa Institute of Science and Technology (OIST) has now reconstructed a much clearer picture of their history, and their findings are published, open access, in Nature Ecology & Evolution. The study supports a rapid mid-Cretaceous diversification of the major decapodiform lineages around 100 million years ago, followed much later by expansion into coastal habitats after the K–Pg mass extinction. [1]

That is, of course, disastrous for creationism. Creationists need the history of life to be short, simple, and static: a few thousand years, separate acts of special creation, and only trivial shuffling of variation within rigidly defined “kinds”. What this study shows instead is exactly what evolutionary biology has long predicted - deep ancestry, branching descent, ecological change over immense spans of time, and major radiations triggered by changing environmental conditions. In other words, not magic, not fixity, and not “kinds”, but evolution. [1]

The researchers conclude that the ancestors of modern squid and cuttlefish probably originated in the deep ocean, where oxygenated refugia may have allowed them to survive while shallow marine environments became increasingly hostile. Ocean acidification in shallower waters would likely have damaged shell-bearing forms, and the later recovery of coastal ecosystems and coral reefs after the K–Pg event opened up new ecological opportunities. What followed was not the survival of a few immutable “created kinds”, but the adaptive expansion of lineages into newly available habitats. [2]

That matters because it gives the lie to one of creationism’s central evasions: the claim that organisms merely vary within fixed boundaries. The history uncovered here is not one of minor tinkering around the edges. It is one of common ancestry, divergence, persistence through catastrophe, and later radiation into new environments. It is precisely the sort of deep, branching history that creationists have to deny, ignore, or misrepresent because their belief system simply has no room for it. [1]

The team reconstructed this history using genome-scale data, including newly sequenced genomes that helped fill key phylogenetic gaps. Together with data from the Aquatic Symbiosis Genomics Project and other existing resources, this allowed the researchers to produce a robust evolutionary tree covering nearly all recognised decapodiform lineages. Because cephalopod genomes are often very large, this kind of work has only recently become practical with modern sequencing technology and computing power. [1]

So, once again, creationism is refuted not by some special anti-creationist project, but as an incidental consequence of real scientific research. Scientists set out to understand the evolutionary history of a fascinating group of animals, and in doing so they uncovered yet more evidence for common descent, ancient Earth history, and the power of evolution to generate biological diversity. Reality, as usual, has no respect for creationist dogma. [1]

The Fallible Bible - How We KNow The Bible's Is Not The Inerrant Word Of A Creator God

Leopard Gecko, Eublepharis macularius

Researchers discover leopard gecko produces females at cooler incubation temperatures and mostly males at warmer ones. This clear sex-determination pattern of leopard gecko has established it as a key model for studying environmental effects on development.

Credit: Professor Shinichi Miyagawa from Tokyo University of Science, Japan.

New study clarifies how temperature shapes sex development in leopard gecko | EurekAlert!

Bible literalists insist that every word in the Bible is true and without error, yet the text itself contains statements that cannot all be true at the same time, so at least one of them must be false*. The Bible also contains factually incorrect statements, such as the assertion in Genesis 6:19 and 7:15–16 that males and females of every ‘kind’ were brought onto the Ark, reflecting the same assumption found in Genesis 1:27 that living creatures were created as male and female.

We now know, unlike the authors of Genesis, that not all species exist as fixed male–female pairs. There are many examples of hermaphrodite creatures that are both male and female; some species that are entirely female, such as the New Mexico whiptail lizard and the marbled crayfish; many aphids and some beetles such as the vine weevil; and species that can change sex during their lifetime, such as certain fish. And, as a recent paper in the journal Developmental Biology by a team of researchers led by Professor Shinichi Miyagawa from the Department of Biological Science and Technology, Tokyo University of Science, Japan, shows, there are also species such as the leopard gecko, Eublepharis macularius, in which sex is not determined by inherited chromosomes at all but by the temperature at which the embryo develops in the egg.

In other words, in some species the difference between male and female is not fixed at conception at all, but depends on something as mundane as the temperature of the nest.

The team showed that there is a discrete window, known as the temperature-sensitive period, during which temperature triggers temperature-dependent sex determination (TSD), activating specific sets of genes that control the development of either testes or ovaries, thereby determining the sex of the developing embryo.

Malevolent Design - Why Autism Refutes Intelligent Design - Or Is the Designer Incompetent?

Evolution's well-tinkered machine.

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Autism Research Breakthrough Discovered by Hebrew University Researchers | en.new.huji

Researchers at the Hebrew University of Jerusalem have uncovered a mechanism that leads to autism. If this is the product of intelligent design then the designer is either incompetent or malevolent, but as so often with diseases that arise when systems go wrong, it is exactly what we expect of an evolved process. Their paper has just been published open access in the journal Molecular Psychiatry.

For proponents of Intelligent Design such as Michael Behe and William Dembski, biological systems are supposed to bear the hallmarks of careful engineering — intricate machines whose parts work together with purpose and precision. But the mechanism uncovered in this study looks nothing like the output of a competent engineer. Instead, it reveals a fragile regulatory network in which a single biochemical modification destabilises a key control protein and sends an entire signalling pathway out of balance. The result is a cascade of downstream effects that ultimately alters brain development and behaviour.

What the researchers have uncovered is not a piece of irreducibly complex machinery but a regulatory system that can be knocked off course by a small perturbation. Nitric-oxide signalling modifies the protein TSC2, leading to its degradation and the subsequent overactivation of the mTOR pathway — a pathway that controls cellular growth and protein synthesis throughout the body. In other words, the pathology arises because a normal biological control system fails to maintain the delicate balance on which it depends.

This is precisely the sort of vulnerability we expect from systems produced by evolution. Evolution does not design organisms from scratch with perfect foresight; it works with what already exists, modifying and repurposing pathways that originally evolved for other purposes. The result is a network of interacting components that usually works well enough to keep organisms alive and reproducing, but which inevitably contains points where the system can fail. When those failures occur, the consequences can be severe.

Far from supporting Intelligent Design, discoveries like this highlight the jury-rigged nature of biological systems. They show that life’s complexity arises not from optimal engineering but from the gradual accumulation of workable solutions over evolutionary time — solutions that function most of the time, yet remain vulnerable to the occasional catastrophic malfunction.