Wednesday, 29 January 2025

Unitelligent Design - How The Giant Clam Has a Needlessly Complex Way To Get Nutrients


How tiny algae shaped the evolution of giant clams | CU Boulder Today | University of Colorado Boulder

You can depend on creationism's idiot designer to never do something the obvious uncomplicated way when there is an obscure and much more complicated way to achieve the same result. It's almost exactly like it's a mindless fool, blundering about without a plan who sometimes happens across something that works and sticks with it, trying to make the best of it with more blundering.

Quite the opposite of what anyone other than a creationist would call intelligent, in fact.

For example, having designed a giant clam to live in nutrient poor coral reefs, it then designed them to have algae living symbiotically inside them, supplementing their megre diet got by filtering the seawater, with sugars manufactured by photosynthesis. This enables the giant clam to grow up to 4.5 feet (1.4 metres) in length and weigh over 700 pound (317 Kg).

Any intelligent designer could have either designed them to live in a less nutrient-poor environment or given them the chloroplasts the algae have to achieve the same result far more simply.

But of course, the giant clam wasn't intelligently designed; it evolved by the utilitarian evolutionary process that is constrained by its evolutionary history and so finds suboptimal but functional processes that a needlessly complex. This complexity impresses creationists because, not understanding how evolution works, they imagine it reflects intelligent design, instead of refuting it.

Tuesday, 28 January 2025

Refuting Creationism - Beetles Were Feeding on Dinosaur Feathers - 100 million Years Before 'Creation Week'


Fossils reveal a 100-million-year-old relationship between feathered dinosaurs and feather-feeding beetles | University of Oxford
Isolated moult of the feather-feeding beetle larva found in the Spanish amber outcrop of Rábago/El Soplao, with detail of its powerful mandibles (right). Length of the moult is less than two millimetres.
Image credit: CN IGME-CSIC.
To normal people, the discovery of feather-eating beetles and feather fragments in 105-million-year-old amber, 30 million years before there were birds might be a clue that something had feathers before bird had them, suggesting that birds might have evolved from whatever that was.

Not so, creationists, however. Creationists conclude that any evidence that doesn't agree with them must be wrong because their evidence-free dogma is sacred and therefore uninfluenced by real-world evidence.

So, the following is just something else for creationists to ignore while they pretend to know better than the experts who have, unlike creationists, actually studied the subject.

It is news that a study, co-led between the Geological and Mining Institute of Spain of the Spanish National Research Council (CN IGME-CSIC) and Oxford University Museum of Natural History (OUMNH) has shown that beetles fed on the feathers of dinosaurs about 105 million years ago. This is based on an analysis of spectacular fossil amber fragments, from the locality of San Just in north-eastern Spain, revealed moults of tiny beetle larvae tightly surrounded by portions of downy feathers.

The feathers belonged to an unknown theropod dinosaur that lived around 105 million years ago, during the Early Cretaceous. This means that the feathers could not have come from a ‘modern bird’ species, since current evidence indicates that this group appeared about 30 million years later in the fossil record, during the Late Cretaceous.

Monday, 27 January 2025

Refuting Creationism - How Leaf Beetles Got New Genes


Asparagus beetle, Crioceris asparagi
Reading the genome and understanding evolution: Symbioses and gene transfer in leaf beetles

Creationists who have been fooled by the disinformation pumped out by the Discovery Institute, especially by William Dembski, believe that the only way an organism can gain new genetic information is by being given it, pre-prepared, by a magic intelligent designer, who has the magical power to assemble new DNA in just the right order and insert it into a species' genome, by a mysterious process that neither Dembski, nor one of his co-misinformers, are willing to explain.

This, of course, ignores the scientific evidence that new genetic information can be acquired by a species in several different ways, not the least of which is by horizontal gene transfer from another species, as researchers from the Max Planck Institute for Chemical Ecology in Jena, the Max Planck Institute of Biology in Tübingen, Germany, and a consortium of international scientists have just shown in respect of the leaf beetles, one of the most successful group of beetles with more than 50,000 different species worldwide.

Sunday, 26 January 2025

The Malevolent Designer - How Creationism Divine Malevolence Brilliantly Designed HIV to Kill Us With


HZI | Decoding HIV's tactics

This should thrill devotees of creationism's intelligent designer because it exposes what a brilliant job it did in designing the human immunosuppressive virus (HIV) that causes the acquired immune deficiency syndrome (AIDS). It was discovered by a group of researchers at the Helmholtz Institute for RNA-based Infection Research (HIRI) in Würzburg and the University of Regensburg, Germany.

They have discovered how HIV hijacks the internal machinery in our cells to ensure its own survival.

Saturday, 25 January 2025

Creationism in Crisis - Early Hominins in Eurasia - >1.95 Million Years Before 'Creation Week'


Research team led by OHIO’s Sabrina Curran finds new evidence that pushes back the arrival of early hominins in Europe; discovery published in Nature Communications
Mandible with cut marks

The problem with trying to maintain a belief that Earth is between 6 and 10 thousand years old is that 99.9975% of its history occurred earlier than 10,000 years ago, so almost everything archaeologists and geologists discover will prove to be from before you believe Earth existed, which, for normal people, might just be more than a hint that Earth is considerably older than you think.

Not so for creationists however, who consider their beliefs to be sacred and unfalsifiable, so the facts must be wrong.

The traditional way is to declare that radioactive decay rates on which geological formations and archaeological artifacts are dated must have changed, sometimes by many orders of magnitude.

These same creationists will also argue in a different context that the laws of nature which govern the structure and behaviour of the Universe and everything in it are so finely tuned to support life, that they must have been set by an intelligent designer.

However one of those 'fine-tuned' parameters is the weak nuclear force that binds the protons and neutrons in the atomic nuclei and for a radioactive atom to decay means that a quantum fluctuation in the energy levels in some of these particles must exceed the weak force binding them together, so the particle is ejected. But, for radioactive decay rates to be several orders of magnitude higher, the weak nuclear force would need to be much lower, below the point at which even stable atomic nuclei form at all. This means, when they believe the universe was created along with atoms, planets and life were created, there would have been no atoms to make it all from. Life would have been impossible.

An added problem is that scientists have shown that radioactive decay rates of different elements remain absolutely constant in a range of extreme temperature and pressure conditions, so there appears to be no support whatsoever for the declaration that decay rates have changed by several orders of magnitude so that an age of 10,000 year or less just happens to look like 300 million years or whatever finding is being waved aside.

If there were any merit in the creationist claim of a fine-tuned Universe, then it has been fine-tuned to make it look 14 billion years old, Earth to look nearly 4 billion years old and living organisms to have been on it for most of that time.

With that in mind then, researchers have just announced that they have found evidence of the presence of hominins in Eurasia 2 million years ago, which pushes back the earliest evidence of hominin presence outside Africa by at least 150,000 years to a time considerably earlier than Homo sapiens first appear in the fossil record - supporting the theory that the earliest migration into Eurasia was by an archaic hominin such as H. erectus.

Refuting Creationism - Walking With Dinosaurs - 166 Million Years Before 'Creation Week'


Excavated footprint.
Credit: Oxford University Museum of Natural History.
Major new footprint discoveries on Britain’s ‘dinosaur highway’ | University of Oxford

Scientists from Oxford and Birmingham Universities have uncovered hundreds of tracks of different sorts of dinosaur in a quarry in North Oxfordshire, and, unlike those in the Paluxy Riverbed, Texas, USA, no-one has carved human footprints in amongst them to fool tourists.

Amongst the tracks are five distinct trackways, the longest of which is 150 meters. Sadly for creationists, we can be sure there will not be any human footprints in the same rock formation because these tracks were made around 166 million years ago when the earliest mammals hadn't diversified even into simians, let alone the African apes.

Friday, 24 January 2025

Refuting Creationism - Our Ancesters Were Vegetarian, 3 Million Years Before 'Creation Week'



'Little Foot' from the Sterkfontein Cave, South Africa
Witwatersrand University
Three million years ago, our ancestors were vegetarian - Wits University

The Australopithecus genus is widely regarded as the immediate ancestor of the Homo genus that includes modern humans, Homo sapiens, but, from new evidence revealed by a team of researchers from the Max Planck Institute for Chemistry in Germany and the University of the Witwatersrand in South Africa, it appears that meat did not become part of our immediate ancestors' diet until after Homo species emerged.

The evidence comes from an isotope analysis of the enamel from the fossilised teeth of seven Australopithecus individuals is strongly indicative of a vegetarian diet with little or no meat consumption.

How they discovered this is the subject of a paper in Science and a new item from Witwatersrand University. Creationists should note that the isotopes of nitrogen on which this analysis is based are stable, so the traditional excuse that radioactive decay rates have changes over time is not relevant here. Besides, they are not the basis of dating these fossils, but of working out where in the food chain these Australopithecines were:

New Book - The Intelligent Design Advocate's Handbook


Ever since teaching creationism in public schools in the USA was found to violate the Establishment Clause, by the Supreme Court in Edwards V. Aguillard (1987) the Discovery Institute has been following the "Wedge Strategy" to try to insert Christiaon fundamentalism into all aspects of American cultural, political and scientific life, using the notion of Intelligent Design as the thin end of the wedge. A campaign with the aim of nothing short of the removal of the Establishment Clause and the dismantling of Thomas Jefferson's Wall of separtion between church and state' as a precondition for establishing a Christian theocracy in the USA.

The thrust of this strategy is to try to cast doubt on the scientific validity of 'Darwinism', i.e., the Theory of Evolution, by misrepresenttion, misinformation and downright lies, to present Intelligent Design creationism as a genuine alternative scientific explanation for biodiversity, a strategy that relies on the false dichotomy fallacy that if evolution is false, creationism wins by default.

How they have been persuing this strategy is exposed in this AI-generated spoof ID advocates handbook, based on a systematic analysis and distillation of the tricks, lies and disinformation promulgated by ID advocates under the leadership of the Discovery Institute over several decade, which has become more concerted since the movement lost badly in Kitzmiller v. Dover Area School District in which ID was exposed as creationism in a lab coat. In that trial, leading ID advocate, Professor Michael J. Behe, whose views have been repudiated by his colleagues at Lehigh University Biological Science Department, was forced to admit under oath that ID is science in the same way that alchemy and astrology are science, and that:

There are no peer reviewed articles by anyone advocating for intelligent design supported by pertinent experiments or calculations which provide detailed rigorous accounts of how intelligent design of any biological system occurred.

Professor Michael J. Behe
Kitzmiller v. Dover, Day 12 Am Session

Tuesday, 21 January 2025

Unintelligent Design - Creationism's Designer Tries Again, and Fails, Five Times


New research reveals why sabre-toothed predators evolved their deadly teeth

Creationism's designer god is nothing if not a trier - or maybe it’s just a slow learner. It tried and failed five times to create carnivores with ferocious-looking but ultimately fatal, sabre teeth.

The problem with long, curved canine teeth is that, although they are good at killing big animals quickly by tearing their throat out or stabbing them to death, because of the additional leverage on the long teeth, and the high risk of striking bone, they are prone to break, leaving their owner to starve to death.

And this has happened at least five times in evolutionary history.

The problem is there is an optimal size and shape depending in the prey species but this produces selection pressure to become more specialised in the prey which in turn produces selection pressure to produce longer, sharper teeth until the tooth shape reaches a pinnacle of shape optimised for that particular prey species. However, there is an evolutionary trade-off in that as the teeth become more specialised, the carnivore becomes more specialised and dependent on the prey species, so they are vulnerable to ecological changes that mean their prey becomes scarce of goes extinct.

How and why this occurred repeatedly due to convergent evolution is the subject of a paper in Current Biology and an open access article in The Conversation by Dr. Tahlia Pollock, Postdoctoral Research Fellow, Evans EvoMorph Laboratory, Monash University. Her article is reprinted here, reformatted for stylistic consistency:

Monday, 13 January 2025

Refuting Creationism - Ability to Perform Complex Tasks Had Already Evolved Before Chimps and Hominins Split


Male chimp cracking nuts.
Photo: Dora Biro.
Study shows that chimpanzees perform the same complex behaviours that have brought humans success | University of Oxford

Time and again, science is showing that characteristics which were once considered uniquely human, and therefore, according to creationists, evidence that humans are a special creation, distinct from all other animals, are in fact shared with other animals.

Instead of being evidence of unique creation, they are evidence of common origins and descent with modification.

On such human characteristic is the ability to perform complex tasks, involving tool use, in organised sequence, and adapt those sequences if necessary to complete the task. In other words, to plan a strategy for achieving a specific goal.

However, a new study has shown that chimpanzees also have this ability, suggesting it was present in the common ancestor before chimps and Hominins diverged some 6 million years ago.

Refuting Creationism - First Americans Were Killing Mammoths 3,000 Years Before 'Creation Week'


An artist’s reconstruction of Clovis life 13,000 years ago shows the Anzick-1 infant with his mother consuming mammoth meat near a hearth. Another individual crafts tools, including dart projectile points and atlatls. A mammoth butchery area is visible nearby. The scene is inspired by the La Prele mammoth site in Wyoming and set against the Montana landscape where the Anzick burial was discovered. Artist Eric Carlson created the scene in collaboration with archaeologists Ben Potter (UAF) and Jim Chatters (McMaster University).
Eric Carlson
Study reveals mammoth as key food source for ancient Americans | UAF news and information

A good 3,000 years before creationism's small god allegedly created the little flat planet with a dome over it described in the Bible, thinking that's what a universe looked like, human beings had migrated to North America and were hunting mammoths.

This is according to a new stable isotope analysis by a team led by researchers from the University of Alaska Fairbanks (UAF). Creationists should note that a stable isotope analysis does not depend on radioactive decay rates, so the evidence-free claim that radioactive decay rates have changed isn't open to them. Stabel isotope analysis shows us what the person's diet consisted of.

The analysis was conducted by Professor Ben Potter of the University of Alaska Fairbanks and James Chatters of McMaster University, and their colleagues. Their findings are published, open access, in the journal Science Advances and is explained in a UAF new release:

Sunday, 12 January 2025

Refuting Creationism - Scientists Got The Date of the Earliest Dinosaur Wrong - It Was Even Earlier


A University of Wisconsin Geology Museum field crew is seen here in 2016 prospecting for additional material at the site in Wyoming where fossils of Ahvaytum bahndooiveche were discovered in 2013. The researchers are Aaron Kufner (left) and Jennifer Lien.

Photo by David M. Lovelace.
Dinosaurs roamed the northern hemisphere millions of years earlier than previously thought, according to new analysis of the oldest North American fossils

The thing about science that distinguishes it from religion is the willingness to change its collective mind when the facts change. This is because science is led by the fact wherever they lead

Science is reasonable uncertainty religion is unreasonable certainty. Religion appeals to those who value certainty over truth, whereas science appeals to those who value truth above certainty.

And scientists have just changed their collective minds about where and when the first dinosaurs appeared.

The consensus had been that they first appeared on the southern end of the supercontinent Pangea before it split into Gondwana in the South and Laurasia in the north and only spread to Laurasia millions of years later.

What can you tell me about the ancient reptile, Ahvaytum bahndooiveche, and its place in the evolution of dinosaurs? Ahvaytum bahndooiveche is a recently identified dinosaur species from the Late Triassic period, approximately 230 million years ago, discovered in what is now Wyoming, USA. This species is notable for being the oldest known dinosaur from the ancient northern supercontinent Laurasia, challenging previous beliefs that dinosaurs originated solely in the southern supercontinent Gondwana.

Discovery and Naming
The fossil remains of Ahvaytum bahndooiveche were uncovered in 2013 at the Garrett's Surprise locality within the Popo Agie Formation in Wyoming. The genus name "Ahvaytum" translates to "long ago," and the species name "bahndooiveche" means "water's young handsome man," a term used by the Eastern Shoshone to refer to both dinosaurs and colorful native salamanders. This naming honors the Eastern Shoshone Tribe, whose ancestral lands include the discovery site, and reflects a collaborative effort between researchers and Indigenous communities.

Physical Description
Ahvaytum bahndooiveche was a small dinosaur, estimated to be about 3 feet (0.91 meters) in length and 1 foot (0.30 meters) in height, comparable in size to a modern chicken but with a notably long tail. The fossil material includes fragmentary hindlimb bones, such as an isolated left astragalus and a partial left femur, suggesting it had progressed beyond the juvenile stage and was still slowly growing.

Evolutionary Significance
This discovery has significant implications for our understanding of dinosaur evolution. Prior to this find, it was believed that dinosaurs originated in Gondwana and later dispersed to Laurasia. The existence of Ahvaytum bahndooiveche in Laurasia during the same period as the earliest known southern dinosaurs indicates that dinosaurs were more widely distributed across the globe earlier than previously thought. This challenges the hypothesis of a delayed dinosaurian dispersal out of high-latitude Gondwana and suggests a more complex scenario for the early evolution and distribution of dinosaurs.

In summary, Ahvaytum bahndooiveche provides valuable insights into the early stages of dinosaur evolution, highlighting a broader and more rapid dispersal of these creatures across ancient Earth than was previously understood.

Saturday, 11 January 2025

Refuting Creationism - Oldest-Known Evolutionary Arms Race in the Cambrian


Oldest-Known Evolutionary “Arms Race” in the Cambrian | AMNH
Examples of Lapworthella fasciculata shells (under scanning electron microscope) from the Mernmerna Formation, Flinders Ranges, South Australia showing holes made by a perforating predator. Scale bars represent 200 micrometers.
Perhaps Creationism's designer god is just a slow learner.

Anyone with an intellect greater than that of a plank should be capable of understanding the utter futility and waste in an arms race in which the strategy is to keep running faster just to stay in the same place. Arms races only make sense as the result of a game plan in which you can't communicate with your opponent and have no way of telling what he or she is thinking and if they gain the upper-hand, you lose. The only safe choice is to up the stakes - and that goes for your opponent too.

It becomes even more incomprehensible if the person you're having the arms race with is yourself, unless you're an amnesic with multiple personality disorder, and yet, if we believe creationists, that's exactly what their putative designer god is doing constantly.

Everywhere we look in nature, organisms are competing with one another for resources, or because one is trying to exploit the other as a food source in a predator-prey relationship or as a parasite trying to live in or on another organism and even killing it or making it weak and sickly as a byproduct of its parasitism. And yet creationists insist there is only one designer designing both sides in these arms races.

For some unfathomable reason, creationists like to imagine the idea of a celestial idiot having arms races with itself in millions of relationships in nature is a much better explanation than these arms races being the inevitable result of mindless evolutionary processes where a slight improvement increases the chances of leaving descendants while reducing the chance of the opponent doing the same, so creating a selection pressure for the next twist in the spiral.

New Book - Twenty Reasons To Reject Creationism: Understanding Evolution


This book looks at the ID/Creationism vs evolution debate from multiple angles and analyses why the science of evolutionary biology refutes the childish notion of intelligent design.

I wrote it because, creationism is dangerous. It replaces evidence-based knowledge with superstition and creates the impression that cultural prejudice and ignorant incredulity are better measures of reality than observation, analysis and reason.

Now more than ever we need our politicians, law-makers and captains of industry to be able to make sense of complex data and use it to make wise decisions, not dismiss it as based on ‘flawed’ concepts and the result of conspiracies designed to turn people away from the ‘truth’ as revealed in ancient texts declared to be holy. As is clearly shown in the Discovery Institute’s Wedge Document and in the wilful misrepresentations of science its fellows dutifully feed to the largely scientifically-illiterate public, there is a hidden political agenda that depends on people believing falsehoods and thinking anti-science is some sort of moral crusade to restore Western civilisation to a notional ideal golden age in pre-renaissance Europe when the slave trade was booming and witch-burning was a regular spectacle in the local town square.

This was a time when people like Copernicus and Galileo would be persecuted and deprived of their livelihood and even their life, for revealing the empirical evidence that Earth orbits the sun – not because they had falsified the data but because the data falsified the Bible. The sacred superstitions, even though empirically proved wrong, had to be defended against the truth as revealed by the physical data.

Friday, 10 January 2025

Common Origins - How The Mammalian Outer Ear Evolved - From Our Ancestral Fish Gills


An earful of gill: USC Stem Cell study points to the evolutionary origin of the mammalian outer ear | USC Stem Cell

I'm sorry if this spoils a creationists new year, but a bunch of scientists from the Stem Cell Lab of the University of Southern California have just published a paper showing an ancient ancestor of mammals, including of course us humans, was a fish.

It comes in the form of evidence that our outer ear develops from the same tissues in the embryo as the gills of fish. These tissues have been exapted by evolution for many new structures, one of which is the outer ear of mammals.

Sunday, 22 December 2024

Refuting Creationism - Jaw-Dropping Evolution in Reptiles


December: Jaw evolution in lizards and snakes | News and features | University of Bristol

A research team from Bristol University, UK with Professor Anthony Herrel of the Mécanismes Adaptatifs et Evolution, Muséum national d'Histoire naturelle, Paris, France has recently published a paper showing the close link between the lower jaw shape of lizards and snakes, known collectively as the lepidosaurs, and their ecological niche as well as factors such as their phylogeny and scaling for body size (allometry).

They found that evolution was rapid in specialised groups such as burrowing and aquatic species.

Thursday, 12 December 2024

Malevolent Design - The Sneak Tactics of Toxoplasma gondii


Toxoplasma gondii parasite uses unconventional method to make proteins for evasion of drug treatment

Here we are with yet another example of an organism that, if there is a designer behind it, that designer can only be described as malevolent and determined to maximise the suffering and misery in the world.

It is, of course, another example of a nasty little parasite which, if you subscribe to the creationist view that complexity 'proves' design, has been designed to ensure we are as vulnerable to is as possible by helping it evade the immune system and other mechanisms, supposedly designed by the same designer god to protect us from the parasites it designs to harm us.

This example is the parasite Toxoplasma gondii, which is notorious for manipulating its natural victims, which are felines and their prey species. For example, mice infected with T. gondii lose their fear of cats so they get eten and the parasite gets into its primary host; infected chimpanzees develop a liking for the smell of leopard urine.

Humans are not the natural secondary host, but the parasite readily infects us as we catch it from cats. It is thought that about one third of humans are infected. Once infected it is impossible to get rid of from the body because, even if antibodies are produced by our immune system, the parasites go into a dormant state as cysts which can form in any organs of the body, including the brain.

Tuesday, 10 December 2024

Refuting Creationism - Ritual Gatherings in a Cave in Israel - 25,000 Years Before 'Creation Week'


Manot Cave, Israel
Earliest deep-cave ritual compound in Southwest Asia discovered The Daily The Daily

Clearly, the authors of the creation myths in Genesis had no knowledge of their own history let alone the history of the rest of the world, as 25,000 years before the time in which they set their 'creation week', there were people holding ritual gatherings in a cave in what is now Israel.

Before the mythical 'creation week' there was supposedly no Earth, no Universe, no living beings and only a god made of nothing which had self-assembled out of nothing according to a design it made before it existed.

Creationists reason that the Universe and life on Earth is too complex to have arisen spontaneously, and it couldn't have all come from nothing, so an even more complex god must have arisen spontaneously out of nothing first then created everything else out of nothing by magic. To a child-like creationists there is no possible flaw in that reasoning.

Monday, 9 December 2024

Refuting Creationism - Another Gap Closed - No God Found


A mating pair of peppered moths, Biston betularia, showing the melanistic and pale forms.
A microRNA solves an evolutionary mystery of butterfly and moth wing colouration - NUS Faculty of Science | NUS Faculty of Science

A regularly-cited example of observed Darwinian evolution is that of the peppered moth which occurs in two forms, the white, speckled form and a melanistic, almost black form. During the industrial revolution, as English northern towns grew and became polluted by smoke from coal-burning factories, so the melanistic form became more common.

Experiments showed that the lighter form became easier for predators to see when the moths were roosting on tree trunks that had become coated in soot, while the melanistic form became harder for predators to see.

Following the decline of the northern towns, the light form again increased back to the former ratio, showing the importance of environmental change in evolution.

This tendency to have melanistic forms is common in the lepidoptera (moths and butterflies) and this tendency was believed to be under th control of as single genomic region surrounding the protein-coding gene “cortex“, common across many species, showing their descent from a common ancestor.

However, new research by international researchers from Singapore, Japan, and the United States of America, led by Professor Antónia MONTEIRO and Dr Shen TIAN from the Department of Biological Sciences at the National University of Singapore (NUS), has shown that 'cortex' is not directly involved in producing melanism, instead, this is controlled by a microRNA from within the 'cortex' genomic region, as another example of how microRNA's control many functions within cells, particular gene expression.

Sunday, 8 December 2024

Refuting Creationism - Domesticated Dogs 2000 Years Before 'Creation Week'


Eurasian/North American Grey Wolf, Canis lupus.

By User:Mas3cf - This file was derived from: Eurasian wolf.JPG, CC BY-SA 4.0, Link
How did humans and dogs become friends? Connections in the Americas began 12,000 years ago | University of Arizona News

At least 2,000 years before Creationists' little god created a small flat planet with a dome over it in the Middle East, human in Alaska were feeding domesticated dogs on salmon, according to the findings of palaeontologists from the University of Arizona.

But of course, the parochial Bronze Age pastoralists from the infancy of our species who made up that myth, couldn't possibly have known anything about when dogs were domesticated, or Alaska for that matter because, as we can see from the tales they made up, they knew nothing of the world beyond a day or two's walk from their pastures and were completely ignorant of the geography, geology and history of the planet and life on it - which is why they made up such implausible origin myths in the first place.

That there were people feeding salmon to their domesticated dogs about 12,000 years ago is the subject of a paper published recently in Science Advances by the Arizona University team led by Assistant Professor François Lanoë, of the School of Anthropology in the College of Social and Behavioral Sciences. They explain their findings in an Arizona University News release

Refuting Creationism - How the 'Lizard' Part of Your Brain Influences Your Thinking


Amygdala is the organ in the limbic system (inner mind) —though a tiny little one is significantly responsible for our emotions which falls in the bracket of implicit memories.
Overthinking what you said? It’s your ‘lizard brain’ talking to newer, advanced parts of your brain: For Journalists - Northwestern University

Few things upset creationists more than evidence that they are not only apes and share a common ancestor with the other African apes, but that they also share a common ancestor even with non-mammals such as reptiles, and yet, as the American evolutionary biologist, Theodosius Dobzhansky reminds us, nothing in biology makes sense without the Theory of Evolution (TOE).

And one thing that does make sense is how the human brain is the result of an evolutionary process with ancestry in those common ancestors, including lizards.

A second thing that creationists who have deluded themselves into believing that mainstream biomedical scientists are giving up on the TOE and adopting the childish notion of intelligent design, will find distressing, is the news that the team who did this piece of research are firmly convinced that the structure of our brain and the way it works is the result of evolution, not magic.

The third thing is how this explains empathy, of which creationists often feign ignorance, claiming they get their sense of right and wrong from their invisible friend and have a handbook to tell them how to behave. The curious belief that even influenced supposed Christian intellectual 'giants' such as the smugly self-satisfied, C.S. Lewis, is despite the fact that one of the Golden Rules of human society, that even the founder of Christianity, Jesus, allegedly told his followers to apply - "Do unto others what you would they do unto you" or words to that effect, depend entirely on having the empathetic ability to know what someone else would want.

The research explains how this ability in humans comes from an ancestral ability to read social signals and form relationships, including an understanding of social hierarchies, possessed even by lizards.

Refuting Creationism - Humans Were Using Fire in Tasmania, 41,000 Years Ago


Emerald Swamp, Tasmania.
Study uncovers earliest evidence of humans using fire to shape the landscape of Tasmania | University of Cambridge

One of creationism's many problems is that being a counter-factual superstition it is easy to refute with facts. For example, trying to cling to the childish belief that the Universe and Earh are both between 6 and 10,000 years old, must be difficult in view of all the evidence of things happening on Earth before then - like people using fire in Tasmania 41,000 years ago.

But, as though to illustrate how creationism is not science but superstition, creationists have a knee-jerk response to that sort of news by simply shrugging their shoulders and declaring that the scientists have either lied, misunderstood the data or failed to recognise that their dating method must be wrong because it doesn't agree with creationists.

The evidence, of course, comes not only from dating the charcoal found in mud, which shows us that people used fire to clear the land, but the sudden change in the pollen found in the same mud at the same time as the charcoal appears, showing how the vegetation was destroyed by fire to be replaced with other flora. This was discovered by a team of researchers from the UK and Australia, who published their findings, open access, recently in the journal, Science, and explained it in a University of Cambridge, press release.

Saturday, 7 December 2024

Malevolent Design - How Malaria Is Being Redesigned to Keep On Killing Children


Study uncovers first evidence of resistance to standard malaria treatment in African children with severe malaria

In another twist of the arms race with human medical science Plasmodium falciparum, the malevolently designed parasite that causes malaria and kills hundreds of thousands of children a year, mostly in Africa, has developed resistance to Artemisinin. Scientists were already aware that resistance had arisen in cases of uncomplicated malaria, but this is the first such incidence of resistance in the more severe form of the disease.

Indiana University School of Medicine researchers, in collaboration with colleagues at Makerere University in Uganda have discovered a case of complicated malaria in a child in Uganda.

Wednesday, 27 November 2024

Mallevolent Design - How Salmonella Sneaks Past Our Defences To Make Us Sick


Intestinal lumen
New study shows how salmonella tricks gut defenses to cause infection

There is a simple paradox at the heart of creationism that I have never even seen an attempt to resolve. It all comes from two beliefs: there is only one designer god capable of designing living organisms and that designer god designed us complete with our immune system with which we can attempt to resist attack by pathogens, and that pathogens are not the work of this design, but are the result of 'genetic entropy' and 'devolution' since Adam & Eve let 'sin' into the world. The fact that Michael J. Behe, who invented that excuse, has let slip that ID Creationism is Bible literalism in a lab coat seems to be lost on his followers who still dutifully insist that it is a scientific alternative to evolution and should be taught in school science class (presumably now with the tale of Adam & Eve taught as real history and 'sin' as a real force in science).

The paradox is, did the designer god give Adam & Eve an immune system, or did it design an upgrade when 'sin' allowed pathogens to exist? If the former, it was anticipating and planning for the so-called 'fall'; if the latter, it lacked foresight so is not omniscient.

But however creationists resolve this paradox they still have to explain why the 'intelligently designed' immune system doesn't work very well and why whatever is designing pathogens seems to be able to overcome it.

The nonsense about 'sin', 'the fall', etc., is trivially easy to refute because any improvement in a parasite's ability to parasitise its host can't possibly be regarded as a devolution from some assumed initial perfection because an improvement can't be worse that what it's an improvement on. The whole nonsense of 'devolution' is biological gobbledygook, intelligently designed to appeal to scientifically illiterate simpletons who want to fit the Bible superstition somewhere in the reasoning without bothering too much about the logic or the biology.

So, the paradox boils down to why an intelligent designer would be having an arms race with itself so the parasites it creates can continue to parasitise the victims it creates complete with their immune system it created to stop them. Creationists normally flee in terror at the mere mention of arms races, which is why you'll never see them discussed in the cult literature apart from where pathogens are waved aside as 'caused by sin', blah, blah, blah...
So, it would be refreshing indeed to see a genuine attempt by an intelligent design creationist try to give some rational explanation, and hopefully without giving away the fact that ID creationism is merely Christian fundamentalism in disguise, for the discovery by a new UC Davis Health study that shows how the Salmonella bacteria, a major cause of food poisoning, can invade the gut even when protective bacteria are present.

As an added embarrassment for creationists, Salmonella is closely related to Escherichia coli (E.coli) that they usually cite Michael J. Behe as 'proving' it must have been designed by their god because its flagellum is 'irreducibly complex'.

First a little AI background information about Salmonella, where it came from and what it does to us:

Tuesday, 26 November 2024

Transitional Form News - Precambrian Common Ancestor of Insects, Arachnids, and Nematode Worms


Researchers Scott Evans (left) and Ian Hughes examine a fossil bed at Nilpena Ediacara National Park.
Droser Lab/UCR.
Tiny worm makes for big evolutionary discovery | UCR News | UC Riverside

The refutation of creationism continues today with news of another one of those 'non-existent' transitional species that turn up with monotonous regularity only to be dismissed by creationists as 'not transitional but fully formed' with now two gaps in the record where there was originally one, or by simply dismissing the dating method as unreliable and coincidentally wrong by an order of magnitude sufficient to make 6-10,000 years look like x-million years.
Another big disappointment for creationists is the fact that this one is from before the Cambrian when their traditional disinformation claims lots of species popped into existence without ancestors by magic in a single event called the 'Cambrian explosion'. The Cambrian 'explosion' was of course a period of some 6-10 million years during which many of the basic body plans of multicellular organisms evolved.

This fossil however was before then and was clearly the ancestral stem species from which a whole range of Cambrian organism, collectively known as Ecdysozoa evolved. These are a group of organisms with an outer cuticle which is shed periodically as the organism grows. The vast group includes nematode worms and arthropods such as insects, spiders, crustaceans like crabs, shrimps, lobsters, and the horseshow crab. So, this discovery, which the palaeontologists have named Uncus dzaugisi sits at the base of this branch of the evolutionary tree. It resembled a nematode worm.

Tell me all about the Ecdysozoa, please. Ecdysozoa is a major clade of animals within the larger group known as Protostomia, distinguished by their unique mode of growth, which involves periodic moulting of an external cuticle. The term "ecdysozoa" comes from the Greek word ecdysis, meaning "to strip off" or "to shed," referring to this moulting process.

Characteristics of Ecdysozoa
  1. Moulting (Ecdysis):
    • The defining feature of Ecdysozoans is the shedding of their cuticle—a tough, non-living outer layer made of proteins, polysaccharides (like chitin), or collagen. This process allows them to grow, as the rigid cuticle limits continuous size increase.
    • After moulting, a new, larger cuticle is secreted, which hardens over time.
  2. Body Structure:
    • Many have a hydrostatic skeleton, relying on fluid pressure in their body cavity for movement and structure.
    • Most lack cilia or flagella in their adult form, distinguishing them from other protostomes.
  3. Diversity:
    • The group includes some of the most diverse and abundant organisms on Earth, ranging from microscopic species to large, visible ones.
  4. Nervous System:
    • Typically, they have a ventral nerve cord and a dorsal brain, with varied sensory adaptations.

Major Groups Within Ecdysozoa
Ecdysozoa includes eight phyla, with two of the most well-known being Arthropoda and Nematoda:
  1. Arthropoda
    • The largest and most diverse group of animals, including insects, arachnids, crustaceans, and myriapods.
    • They have segmented bodies, jointed appendages, and a hard exoskeleton.
    • Examples: Butterflies, crabs, spiders, centipedes.
  2. Nematoda (Roundworms)
    • Microscopic to macroscopic worms with a cylindrical, unsegmented body.
    • Found in nearly every habitat on Earth, often as parasites in plants and animals.
    • Examples: Caenorhabditis elegans (a model organism), Ascaris (a human intestinal parasite).
  3. Tardigrada (Water Bears)
    • Microscopic, water-dwelling animals known for their extreme resilience to harsh environments.
    • They can survive desiccation, radiation, and even the vacuum of space.
  4. Onychophora (Velvet Worms)
    • Segmented, soft-bodied terrestrial animals with slime glands used for capturing prey.
  5. Priapulida
    • Marine worms with a tubular body, often found burrowing in sediment.
  6. Kinorhyncha
    • Tiny, segmented marine animals often referred to as "mud dragons."
  7. Loricifera
    • Microscopic animals inhabiting marine sediment, with a complex, retractable body.
  8. Nematomorpha (Horsehair Worms)
    • Parasites as larvae, often controlling the behaviour of their insect hosts.

Evolution and Phylogeny
  • Ecdysozoa was proposed as a clade in 1997, based on molecular evidence (notably studies of ribosomal RNA).
  • They share a common ancestor with other protostomes but diverged early to adopt their unique moulting strategy.
  • Their evolutionary success is evident in their sheer numbers and adaptability, especially in arthropods.

Ecological and Economic Importance
  1. Ecological Roles:
    • Many ecdysozoans are key components of ecosystems as decomposers, predators, prey, and parasites.
    • Insects, a subgroup of arthropods, are critical for pollination and nutrient cycling.
  2. Economic Impact:
    • Beneficial: Insects (e.g., bees) aid in agriculture, while nematodes play a role in soil health.
    • Harmful: Some ecdysozoans are pests or parasites causing diseases in humans, animals, and crops.

Fun Facts
  • Tardigrades can enter a state called cryptobiosis, surviving for decades without water or food.
  • Arthropods are the most successful phylum, with over a million described species, and likely many more undiscovered.
  • Nematodes may account for about 80% of individual animals on Earth.
The discovery was made by a team from University of California, Riverside (UCR), led by Professor Mary Droser a distinguished professor of geology. The have explained their findings in the journal, Current Biology, and in a UCR press release:
Tiny worm makes for big evolutionary discovery
UC Riverside scientists have described ‘Uncus,’ the oldest ecdysozoan and the first from the Precambrian period
Everyone has a past. That includes the millions of species of insects, arachnids, and nematode worms that make up a major animal group called the Ecdysozoa. Until recently, details about this group’s most distant past have been elusive. But a UC Riverside-led team has now identified the oldest known ecdysozoan in the fossil record and the only one from the Precambrian period. Their discovery of Uncus dzaugisi, a worm-like creature rarely over a few centimeters in length, is described in a paper published today in Current Biology.

Scientists have hypothesized for decades that this group must be older than the Cambrian, but until now its origins have remained enigmatic. This discovery reconciles a major gap between predictions based on molecular data and the lack of described ecdysozoans prior to the rich Cambrian fossils record and adds to our understanding of the evolution of animal life.

Mary L. Droser, co-author Earth and Planetary Sciences University of California, Riverside
Riverside, CA , USA.


The ecdysozoans are the largest and most species-rich animal group on Earth, encompassing more than half of all animals. Characterized by their cuticle — a tough external skeleton that is periodically shed — the group comprises three subgroups: nematodes, which are microscopic worms; arthropods, which include insects, spiders, and crustaceans; and scalidophora, an eclectic group of small, scaly marine creatures.

Like many modern-day animal groups, ecdysozoans were prevalent in the Cambrian fossil record and we can see evidence of all three subgroups right at the beginning of this period, about 540 million years ago. We know they didn’t just appear out of nowhere, and so the ancestors of all ecdysozoans must have been present during the preceding Ediacaran period.

Ian V. Hughes, first author
Organismic and Evolutionary Biology
Harvard University, Cambridge, MA, USA.


DNA-based analyses, used to predict the age of animal groups by comparing them with their closest living relatives, have corroborated this hypothesis. Yet ecdysozoan fossil animals have remained hidden among scores of animal fossils paleontologists have discovered from the Ediacaran Period.

Top: Uncus fossil from Nilpena Ediacara National Park. The numbers correspond to the coordinates of this fossil on the fossil bed surface. Bottom: 3D laser scans enable the researchers to study the fossils’ shape and curvature.
Droser Lab/UCR.
Ediacaran animals, which lived 635-538 million years ago, were ocean dwellers; their remains preserved as cast-like impressions on the seabed that later hardened to rock. Hughes said uncovering them is a labor-intensive, delicate process that involves peeling back rock layers, flipping them over, dusting them off, and piecing them back together to get “a really nice snapshot of the sea floor.”

This excavation process has only been done at Nilpena Ediacara National Park in South Australia, a site Droser and her team have been working at for 25 years that is known for its beautifully preserved Ediacaran fossils.

Nilpena is perhaps the best fossil site for understanding early animal evolution in the world because the fossils occur during a period of heightened diversity and we are able to excavate extensive layers of rock that preserve these snapshots. The layer where we found Uncus is particularly exciting because the sediment grains are so small that we really see all the details of the fossils preserved there.

Assistant Professor Scott Evans, co-author
Earth, Ocean, and Atmospheric Sciences
Florida State University, Tallahassee, FL, USA.


While the team didn’t set out to find an early ecdysozoan during their 2018 excavation, they were drawn to a mysterious worm-like impression that they dubbed “fishhook.”

Sometimes we make dramatic discoveries and sometimes we excavate an entire bed and say ‘hmmm, I’ve been looking at that thing, what do you think?’ That’s what happened here. We had all sort of noticed this fishhook squiggle on the rock. It was pretty prominent because it was really, really deep.

Because it was deep, we knew it wasn’t smooshed easily so it must have had a pretty rigid body. At this point we knew this was a new fossil animal and it belong to the Ecdysozoa.

Ian V. Hughes


After seeing more of the worm-like squiggles the team paid closer attention, taking note of fishhook’s characteristics. Other defining characteristics include its distinct curvature and the fact that it could move around — seen by trace fossils in the surrounding area. Paul De Ley, an associate professor of nematology at UCR, confirmed its fit as an early nematode and ruled out other worm types.

The team called the new animal Uncus, which means “hook” in Latin, noting in the paper its similarities to modern-day nematodes. Hughes said the team was excited to find evidence of what scientists had long predicted; that ecdysozoans existed in the Ediacaran Period.

It’s also really important for our understanding of what these early animal groups would have looked like and their lifestyle, especially as the ecdysozoans would really come to dominate the marine ecosystem in the Cambrian.

Ian V. Hughes

The paper is titled “An Ediacaran bilateran with an ecdysozoan affinity from South Australia.” Funding for the research came from NASA.
Highlights
  • A new, motile bilaterian is described from the Ediacaran of South Australia
  • Features including morphology and movement suggest an ecdysozoan affinity
  • This discovery firmly places ecdysozoans in the Precambrian

Summary
Molecular clocks and Cambrian-derived metazoans strongly suggest a Neoproterozoic origin of many animal clades.1,2,3,4 However, fossil bilaterians are rare in the Ediacaran, and no definitive ecdysozoan body fossils are known from the Precambrian. Notably, the base of the Cambrian is characterized by an abundance of trace fossils attributed to priapulid worms,5,6 suggesting that major divisions among ecdysozoan groups occurred prior to this time. This is supported by ichnofossils from the latest Ediacaran or early Cambrian left by a plausible nematoid,7,8,9 although definitively attributing this inferred behavior to crown-Nematoida remains contentious in the absence of body fossils.10 Given the high probability of the evolution of Ecdysozoa in the Proterozoic, the otherwise prolific fossil record of the Ecdysozoa, and the identification of more than 100 distinct Ediacaran genera, it is striking that no Ediacaran body fossils have been confidently assigned to this group. Here, we describe Uncus dzaugisi gen. et. sp. nov. from the Ediacara Member (South Australia), a smooth, vermiform organism with distinct curvature and anterior-posterior differentiation. The depth of relief of Uncus is unique among Ediacara fossils and consistent with a rigid outer cuticle. Ecological relationships and associated trace fossils demonstrate that Uncus was motile. Body morphology and the inferred style of movement are consistent with Nematoida, providing strong evidence for at least an ecdysozoan affinity. This validates the Precambrian origin of Ecdysozoa, reconciling a major gap between predicted patterns of animal evolution and the fossil record.4

I think my favourite quote from one of the scientists is "We know they didn’t just appear out of nowhere, and so the ancestors of all ecdysozoans must have been present during the preceding Ediacaran period", which just about describes the difference between someone who knows the Theory of Evolution is correct because he understands the evidence for it, and a creationists who believes in fully formed living organisms made from nothing, magically popping into existence from nowhere, with magic spells cast by an unproven supernatural deity their mummy and daddy told them about.

The ancestral form, the transitional species, was in exactly for rock formation of exactly the right age which the theory of evolutionary decent with modifiction from a common ancester predicted.

And in case a creationist is tempted to try the 'radiometric dating is flawed/wrong/faked fallacy. The Ediacaran rock formation these fossils were found in was independently dated several different ways that all converged on a 98-million-year span from 635 to 538 million years ago known as the Ediacaran. The Most important being the Uranium-Lead (U-Pb) dating of zircons found in the layers of volcanic ash sandwiched within the rocks. To compress 600 million years of radioactive decay into less than 6-10,000 years would have caused Earth's rocks to melt and the seas to boil away. And the weak nuclear force would have been so weak that atoms could not have formed, let alone life, and there would have been no planet and no universe to fine tune for it either.
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