Religion, Creationism, evolution, science and politics from a centre-left atheist humanist. The blog religious frauds tell lies about.
Tuesday, 19 March 2024
Creationism's Heath-Robinson Designer - Muddling Through With Even More Ramshackle Complexity
Gut Bacteria Make Neurotransmitters to Shape the Newborn Immune System | Newsroom | Weill Cornell Medicine
The story so far, according to the Creationists Gospel:
Once upon a time, just a few thousand years ago, a magic man in the sky magicked a small flat planet with a dome over it in the Middle East, and then made some people to live on it.
It also made lots of harmful bacteria and other parasites to live in them and make them sick, but luckily, it also gave the humans an immune system to stop the parasites it made to make them sick, from doing what it designed them to do.
The only problem was that the ramshackle immune system it designed, which often doesn't do what it was designed to do, is also a little hypersensitive and prone to treating other things like the body it should be protecting as a parasite and mounting an attack on it so we suffer from all sorts of 'autoimmune' diseases that require another layer of complexity to keep in check. The other thing about it is that it needs training and until that's complete, it will treat all manner of things as parasites, including the food babies eat - and that could result in food allergies that would make life miserable!
But rather than do the simple thing and design the immune system to be able to tell the difference between food and harmful parasites, creationism's version of William Heath-Robinson went for one of the most bizarre solutions you can imagine. Rather like William Heath-Robinson's solution to an every-day problem, it co-opted things in the baby's environment to perform functions they were never intended to perform, like an upright piano being used to stand a step-ladder on to give it enough height, or a stick and some string being used to mend a broken spoke in a wheel, creationism's designer co-opted some of the bacteria that live in a baby's gut.
How it did this is explained in a free access paper in Science Immunology by a team of researchers from the Department of Pediatrics at Weill Cornell Medicine, led by Assistant Professor Dr. Melody Zeng of the Gale and Ira Drukier Institute for Children's Research. Their work is described in a Weill Cornel Medicine news item:
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Biology
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Creationism in Crisis
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Health
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Microbiology
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Science
Creationism in Crisis - An Ancestral Croccodile from 215 Million Years Before 'Creation Week'
An artist’s interpretation of the newly identified aetosaur Garzapelta muelleri.
Márcio L. Castro.
Tanks of the Triassic: New Crocodile Ancestor Identified | Jackson School of Geosciences | The University of Texas at Austin
In that very long period of Earth's history, long before creationism's god decided to create a small flat planet with a dome over it, and before even the dinosaurs rose to pre-eminence, another group of reptiles had evolved into armour-plated tank-like creatures with thick body-plates and fringes of curved spikes to deter predators. Some of these were later to evolve into the modern crocodiles.
Now three researchers from the University of Texas at Austin have identified a new species that lived 215 million years ago in the Triassic. The newly-identified species was found on a museum shelf where it had been since its discovery in Garza County in northwest Texas, some 30 years ago by the palaeontologist, Bill Mueller. The researchers have named the new species in his honor, as Garzapelta muelleri (Pelta = plate).
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Biology
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Creationism in Crisis
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Geochronology
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Geology
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Monday, 18 March 2024
Religion News - People Who Believe Absurdities Will Commit Atrocities!
The blood sacrifice on which the Christian religion is founded
Why Religions Seem to Involve Outlandish Beliefs | Psychology Today
It's axiomatic that people who can believe absurdities can be persuaded to commit atrocities.
One only need look at the history of just about every world religion to know that is especially true of people who hold to religious beliefs, yet most religious people will look at other religions and wonder how on Earth they can believe that nonsense, while having no understanding why others who look at their beliefs have the same thoughts.
How many devout Christians, for example, would find nothing strange in the belief that the sun was swallowed each evening by the goddess Isis, who then gave birth to it every morning or that ancient Celtic chiefs physically mated with the Earth goddess at Tara to unite the Irish people with the land they lived on?
Yet those same Christians have no difficulty believing that the blood sacrifice of an innocent person can atone for collective 'sins' inherited from ancient ancestors or that the dismembered bodies of ancient holy men can somehow persuade a god to change his perfect plans for their better one, or an omniscient, omnibenevolent god needs to be told about a wrong and why if should be righted, or a mind-reading god needs to be told their thoughts.
And a Moslem who believes the founder of their religion split the moon in half and flew to Heaven on a magic flying creature finds it incomprehensible that saying prayers to a painting of an ancient holy man or priest can change the direction of the universe, or that the prohibition on 'graven images' doesn't apply to gold-covered icons or depictions of a god nailed to a stick, worn by people who believe tiny images of a blood sacrifice or miniature instrument of torture worn around their neck protects them from evil spirits?
There are even people who believe the sun can be made to perform strange maneuvers in the sky while no-one else on Earth noticed it and without Earth itself needing to suddenly change its speed and direction of rotation or orbital path round the sun. Even the leaders of a major branch of Christianity, with a whole panel of expert scientific advisors, believe that really happened and continue to send people to Fatima where it is alleged to have happened - just one of the many equally implausible and evidence-free beliefs orthodox Catholics needs to hold.
Even coeliac suffering Catholics can believe a piece of wafer, when the right spells are cast over it, miraculously becomes the body of a dead god to be consumed in a cannibalistic ritual, while knowing they need to avoid eating it to avoid the consequences of gluten intolerance! That's a condition of belonging to a cultural group called 'Catholics'.
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Humanism
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Morality
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Superstition
How Science Works - Checking, Rechecking and Questioning What We Think We Know. The Only Certainty Is That There Are No Certainties
New research suggests that our universe has no dark matter | About us
A leading theoretical physicist has questioned whether dark matter really exists.
Dark Matter is a placeholder for what appears to be mass without substance which suffuses the universe, observable only by the gravity it exerts and thought by mainstream cosmologists to account for 27% of the matter in the universe with 'ordinary' matter making up just 5%. The rest - 68% - being composed of dark energy, another placeholder for something theory says should be there to account for the expansion of the universe, but which we don't have a model for in the standard model of particles and related fields.
I don't pretend to understand this stuff, but I'll post it here by way of a rebuttal of creationist claims that scientists devise experiments to try to prove preconceptions and that peer-review is just to ensure conformity to scientific orthodoxy.
Besides, the HTML coding is the sort of challenge I enjoy.
In fact, science is about continued reassessment and revision with names made not by confirming preconceptions but by overthrowing established consensus or exposing flaws in it which require further investigation. The leading theoretical physicist is Professor Rajendra Gupta of the Faculty of Science, University of Ottawa, Canada, who has just published a paper in The Astrophysical Journal. He has also authored an earlier paper which he believes shows the Universe to be about twice as old as the mainstream consensus believes it to be, so he can hardly be described as subscribing to some establishment orthodoxy. His work is explained in a University of Ottawa News release:
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Cosmology
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Creationism in Crisis
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Physics
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Science
Saturday, 16 March 2024
Why Religious People Find Atheism and Science Hard To Understand - Study Shows Atheists Are Generally More Intelligent Than Religious People
Why Are Religious People (Generally) Less Intelligent? | Psychology Today
One of the frustrating things about trying to debate with religious people in the social media, especially fundamentalists and creationists, is that they seem to have difficulty understanding simple logic such as the idea that the only reason for belief is evidence or the fact that lots of people believe something doesn't affect the truth of the belief.
There is also the impression (actually, it’s more than an impression, it seems to be a characteristic) that they think ignored evidence can be disregarded, so they will never read an article showing their beliefs to be wrong.
They generally seem more easily fooled by, for example, believing that an internet source supports them, when it is almost a rule that a link to a science paper provided by a fundamentalist will always say the opposite to what they claim it says, or that the ridiculous parody of science they've been fed by a creationist disinformation site such as AnswersInGenesis.com that no sane person would believe, is actually what real scientists believe. They have simply swallowed a lie and didn't see any need to check.
So, why do so many fundamentalists come across as limited in their ability to assimilate information and use it as the basis for opinions, other than an arrogant assumption that their beliefs must be true because they believe them, so no evidence is required and any contradictory evidence can be dismissed out of hand as 'wrong' or 'lies' or part of a giant conspiracy, and why do so many creationists came across as having the thinking ability of a toddler with a teleological view of the universe where even elementary particles are sentient and need to be told how to behave and which rules they must obey?
A meta-analysis of 63 earlier studies showed a statistically significant negative correlation between IQ and religiosity.
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Atheism
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Creationism
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Intelligence
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Religion
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Science
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Secularism
Friday, 15 March 2024
Creationism in Crisis - From Where Did The Bible's Authors Get The Idea That Humans Are Materially Different To Other Animals? And Why Were They Wrong?
Impression of a meeting of the Athenian Assembly on the Pnyx
Artist unknown
Friday essay: from political bees to talking pigs – how ancient thinkers saw the human-animal divide
It's a fundamental part of the Abrahamic religions and other religions that there is something materially different to humans, above and beyond the sort of difference that distinguishes one species from another. Biologically, of course, this is nonsense as any study of comparative anatomy and physiology will show. Humans are just another mammal, albeit with some highly evolved abilities that other species lack such as language, the ability to invent narrative, etc. The differences, as with the differences between any pair of related taxons is quantitative, not qualitative.
So, from where did religions and, especially the Abrahamic religions - Judaism, Christianity and Islam - get the idea of human exceptionalism from and why did they need to invent narratives to explain it, usually in terms of a special creation or a special closeness to gods - even a familial relationship or at least created in their image like children to their parents? In fact, as we will see, it’s much more likely that gods were created by humans in their image.
In the following article, reprinted from The Conversation, Professor Julia Kindt, Department of Classics and Ancient History, University of Sydney, SNW, Australia, explains the ideas origins in Ancient Greece and why it is wrong. Her article has been reformatted for stylistic purposes:
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Biology
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Creationism in Crisis
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Creationism in Crisis - Bird Watching In The Age Of Dinosaurs - About 70 Million Years Before 'Creation Week'
Hesperornis
Jaime Chirinos
A brief guide to birdwatching in the age of dinosaurs
What would it have been like to go bird-watching in that very long period of pre-'Creation Week' history just before a cataclysmic meteor strike cause the extinction of almost all the dinosaurs, 66 million years before creationists believe their god created a small, flat planet with a dome over it in the Middle-east?
At that time, Earth had a large population of dinosaurs, some of which were later to become modern birds which evolved to fill the vacated niches formerly occupied by the dinosaurs, while another survivor, a small rat-like early mammal, the descendant of mammal-like reptiles radiated into modern mammals.
For a period, these early birds, the avian dinosaurs which had evolved from the bipedal theropod dinosaurs, formed two major groups - the ornithuromorphs and the enantiornithine.
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Biology
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Creationism in Crisis
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Evolution
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Fossils
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Ornithology
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Science
Thursday, 14 March 2024
Creationism in Crisis - Rice Paddy Snakes In Thailand Diversified About 2.5 Million Years Before 'Creation Week'
Hypsiscopus plumbeus
Photo: Bryan L. Stuart
Rice paddy snake diversification was driven by geological and environmental factors in Thailand, molecular data suggests | KU News
In one of those far-away places that the simple-minded authors of the story in Genesis about a small flat Earth with a dome over it being magicked up out of nothing in the Middle East, 10,000 years ago, could never have guessed existed, and some 2.5 million years before they though Earth existed, major environmental changes were driving the diversification of a species of snake into several descendant species, just as the Theory of Evolution predicts.
If those simple-minded Bronze Age pastoralists had known about it and understood its significance in terms of the history of life on Earth and the dynamic geology of the planet, just imagine how different their imaginative tale would have been! As it was, they had to do their best with what little knowledge and understanding they had.
The snake in question was the Rice Paddy snake, otherwise known as a mud snake, and the far-away place was Thailand where the rise of the Khorat Plateau caused environmental changes that resulted in the evolutionary diversification of the Hypsiscopus genus.
The team of researchers from various American and Southeast Asian Universities, who have shown this link between environmental change and evolutionary radiation in a genus was led by Dr. Justin Bernstein, of the University of Kansas Center for Genomics. Their findings are published open access in Scientific Reports and are explained in a Kansas University news release:
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Creationism in Crisis - Dinosaur Footprints In Alaska from 100 Million Years Before 'Creation Week'!
Part of the Nanushuk Formation, visible as a darker slanted rock layer, rises in a bluff above a bend of the Kukpowruk River. A large number of dinosaur tracks were found in this area.
Photo: Anthony Fiorillo
Alaska dinosaur tracks reveal a lush, wet environment | Geophysical Institute
About 100 million yearsd before creationism's god decided to create a small flat planet with a dome over it to keep the water about its sky out, there were dinosaurs living in what is now northern Alaska. The problem for creationists is that the people who wrote their favourite creation myths were ignorant both of dinosaurs and Alaska so had no idea their tales needed to include something about them, which is why everything they wrote about either happened within a day or two's walk if the Canaanite Hills or were plagiarized from nearby cultures.
Now a team of paleontologists and archaeologists have discovered fossilised dinosaur footprints and the remains of plants in the Nanushuk Formation that show the climate there was warmer and wetter than today, at a time when species were migrating over the landbridge between Siberia in Asia and North America.
Unlike the Paluxy hoax, which had creationists fooled for the best part of a decade, there were no human footprints (hand-carved or otherwise) associated with these dinosaur tracks.
Because creationists will try to falsify the aging of the Nanshuk Formation, claiming the method must have been flawed to such an extent that if made 10,000 years or less look like 100 million years, here is actually how the dating was done - it’s; those dreaded zircons in volcanic deposits again, plus stratigraphy based on index fossils found in rocks of known age:
Do you have any information on the Nanushuk Formation in northern Alaska and how its age was estimated? The Nanushuk Formation is a geological formation located in northern Alaska, particularly in the North Slope region. It is primarily composed of sandstone, siltstone, and shale, and it contains significant oil and gas reserves. The formation is of great interest to geologists and petroleum geologists due to its hydrocarbon potential.The team, led by Dr. Anthony R. Fiorillo of the New Mexico Museum of Natural History & Science, Albuquerque, USA and including Professor Paul McCarthy of University of Alaska Fairbanks (UAF) College of Natural Science and Mathematics, have published their findings open access in the journal Geosciences. It is explained in a UAF news item:
The age of the Nanushuk Formation has been estimated through various methods, including biostratigraphy and radiometric dating of volcanic ash layers within the formation. Biostratigraphy involves the study of fossil assemblages found within the rocks to determine their relative ages. By comparing the fossils present in the Nanushuk Formation to those found in other formations with well-established ages, geologists can infer the approximate age of the Nanushuk Formation.
Additionally, radiometric dating techniques, such as radiocarbon dating or uranium-lead dating, can be used to determine the absolute ages of specific minerals or volcanic ash layers within the formation. These methods rely on the decay of radioactive isotopes within the rocks to estimate the time since their formation.
Through a combination of these techniques, geologists have estimated that the Nanushuk Formation was deposited during the Late Cretaceous period, approximately 70 to 80 million years ago. However, the precise age estimates may vary depending on the specific location within the formation and the methods used for dating.
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Wednesday, 13 March 2024
How Science Works - Giraffes - A single Pan-African Species Or Several Distinct Species?
Giraffe trio crossing plain, Etosha, Namibia
Photo: Mogens Trolle
Gene flow in giraffes and what it means for their conservation – Department of Biology - University of Copenhagen
In an evolutionary picture that resembles that of humans, giraffes appear to have speciated, or partially speciates at different times and in different parts of their range, then hybridized, before splitting again with regular gene-flow between the groups.
Similarly, though over a greater range, humans seems to have partially speciated into isolated populations in Africa before coming together again and spreading to Eurasia as Homo erectus which then split into Neanderthals, Denisovans and possibly others before meeting up with H. sapiens coming out of Africa in a second wave, to interbreed with the Eurasian species. The result is genetically distinct populations with evidence of ancient hybridization and gene flow.
Because conservation efforts tend to be directed at the species level, it is important for giraffe conservation to determine whether there is a single pan-African species with local sub-species or whether there are four or more species, each with a smaller population and therefore more vulnerable to habitat destruction and extinction.
To try to resolve this issue, as part of the African Wildlife Genomics research framework led by research groups at the Department of Biology at the University of Copenhagen, scientist carried out an extensive genome analysis to establish whether the different populations have been genetically isolated for long enough to be regarded as distinct species, even though, in captivity, they freely interbreed.
The results were a little surprising but highlight the difficulty in determining whether speciation has occurred within a population where differentiation is still in progress and few barriers to hybridisation have arisen. The problem is compounded by the fact that there is not a fixed definition of species, although biologists understand what the term means in a given context.
I've previously written blog posts about this problem, using the Eurasian crows as an example - an article incidentally which was recommended reading for Scottish biology students doing their 'Highers'.
The researchers have published their findings open access in the online Cell Press journal, Current Biology and explain it in a news item from the University of Copenhagen Biology Department:
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Tuesday, 12 March 2024
Malevolent Design - How The Malaria Parasite is 'Designed' To Evolve And Outwit Medical Science
The Malaria parasite generates genetic diversity using an evolutionary ‘copy-paste’ tactic.
Credit: Karen Arnott/EMBL-EBI,
Isabel Romero Calvo/EMBL
Isabel Romero Calvo/EMBL
The malaria parasite generates genetic diversity using an evolutionary ‘copy-paste’ tactic | EMBL
Devotees of creationism’s divine malevolence would be conflicted by this news if they understood it, because it shows the creative genius of any intelligent designer who could come up with this system, but, it looks like it did so (if you believe it couldn't happen naturally) by setting up an evolutionary process that creationists are obliged by dogma to believe doesn't work.
The news is that the organisms that causes malaria, Plasmodium falciparum, is 'designed' to quickly find a way to overcome the anti-malarial drugs medical science has developed to cure people suffering from it and to prevent others from getting malaria, by evolving very quickly.
The discovery was by researchers at European Molecular Biology Laboratory's (EMBL’s) European Bioinformatics Institute who have identified a mechanism of ‘copy-paste’ genetics that increases the genetic diversity of the parasite at accelerated time scales. This helps solve a long-standing mystery regarding why the parasite displays hotspots of genetic diversity in an otherwise unremarkable genetic landscape. Copy-paste' is a way of doing something creationists insist is impossible without the aid of god-magic of increasing the genetic information in a genome and making it available for evolution by mutation and selection without any loss of function in the original copied genes.
The team have recently published their finding in the open access journal PLOS Biology and describe it in an EMBL news item:
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Unintelligent Malevolence - Pathogens 'Designed' to Beat Medical Science In Two Different Ways
Acinetobacter baumannii
Escherichia coli
What makes a pathogen antibiotic-resistant? | Sanford Burnham Prebys
One of todays examples of the stupidity of creationism is something of a novelty. Usually, by applying the central tenets of creationism, any putative designer of living things like parasites either appears malevolent (and sometime it has to be said, malevolent at a near genius level in the ways it finds to make us and other animals sick) or it looks incompetent in that its 'solutions' are often to problems of its own making and more often than not to solutions it designed for one side of an arms race which it now trets as problems for the other side.
But today's example can only be described as an example of incompetent malevolennce, as creationism's putative designer, faced with the same 'problem' of medical science developing antibiotics effective against two different species of pathogen, set about designign two completely different 'solutions' to this problem. - Talk about re-inventing the wheel!
The pathogens are: Escherichia coli and Acinetobacter baumannii.
Creationists will probably be familiar with Escherichia coli (E. coli) because they believe their guru, Michael J Behe, 'proved' their god exists by claiming (falsely) that E. coli's flagellum must have been intelligently designed because he didn't know it evolved out of a pre-exiting structure and couldn't think how else it could have evolved. But then such is the standard of creationist apologetics!
What Behe had unwitting done was destroy the traditional excuse creationists use to explain pathogens like E. coli by blaming them on another 'designer' called 'Sin' which somehow creates living organisms although the creationit designer god is the only entitiy capable of designing livign things, so any example of 'intelligent design, real or imaginary, if 'proof' of this designer god's existance.
So, what creationists are now left with is an E.coli with a flegellum designed by their god to make it better at making us sick, and now resitant to antibiotics to help it win against medical science trying to prevent it makign us sick!
But what creationists are less likely to be familiar with is the pathogen, Acinetobacter baumannii, so here is a little background:
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Creationism in Crisis
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Monday, 11 March 2024
Unintelligent Design - RuBisCO Is Slowly Evolving - And Becoming Even More Embarrassing For Any Creationist Who Understands It
The world’s most prolific CO2-fixing enzyme is slowly getting better | University of Oxford
The world’s worst enzyme, ribulose-1,5-bisphosphate carboxylase/oxygenase, or RuBisCo as it is known, has featured in these blog posts several times and it described in my book, The Unintelligent Designer: Refuting the Intelligent Design Hoax as an example of the lack of intelligence in biological systems, and, as such, why it would be a major embarrassment to creationists - if they understood it.
Briefly, RuBisCo is one of the most ancient enzymes known and became an essential component of photosynthesis early on in the history of life on Earth when the first cyanobacteria evolved the ability to use the energy from sunlight to fix the carbon in atmospheric carbon dioxide (CO2) to build the sugar glucose. Eventually, these photosynthesising cyanobacteria became incorporated into plant cells as the chloroplasts to produce the green plants at the base of most food chains. Because it is so inefficient, it quickly became probably the most abundant enzyme on Earth, making up with quantity what it lacked in quality.
But, evolution, unlike good intelligent design, is a one-way, utilitarian process in which whatever works better than preceded it will be retained and will provide the next basis for further evolution, because evolution has no mechanism to scrap a bad design and start again as any backward step will inevitably be worse, so will be quickly eliminated.
Tell me all about RuBisCo and why it's so inefficient. RuBisCo, or ribulose-1,5-bisphosphate carboxylase/oxygenase, is an enzyme crucial for the process of carbon fixation in plants, algae, and some bacteria. It catalyzes the first major step of the Calvin cycle, which is the primary pathway for carbon dioxide fixation in photosynthesis. Despite its importance, RuBisCo is often considered inefficient for several reasons:
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Malevolent Design - How a Bacterium Carries a Virus That Selectively Kills Male Insects And Only Allows Infected Females To Breed
How does a virus hijack insect sperm to control disease vectors and pests? | Penn State University
Wolbachia are a genus of bacteria that form a symbiotic relationship with about 50% of arthropod species, including insects and spiders but they can also manipulate the species for their own ends (in terms of breeding success). They are aided in this by a virus which is incorporated in their genome which has been shown to join forces with Wolbachia to ensure their own reproductive success in the form of females infected with the virus-bearing Wolbachia.
So completely have Wolbachia integrated with insects that one species of fruit fly has the entire Wolbachia genome incorporated into its own genome, making it, biologically, both bacterium and fruit fly.
One way Wolbachia ensure their own survival at the expense of the species of insect they infect is by making the sperm and egg incompatible if the female is not also a carrier of the right species of Wolbachia. And, to be on the safe side, two proteins produced by the virus break the sperm's DNA so any resulting embryo will be defective and will fail to develop. This ensures that only the females carrying the infection can breed, so increasing the Wolbachia and its virus in the gene pool.
The team who discovered this nasty little virus and how it acts selfishly, was co-led by Professor Seth R. Bordenstein, of the One Health Microbiome Center at Pennsylvania State University. They have published their findings in Science and described it in a Penn State News item.
But first, a little background on Wolbachia:
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Biology
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Insects
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Sunday, 10 March 2024
Unintelligent Design - How Epigenetic Settings Are Passed To Daughter Cells - Even William Heath Robinson Would Be Impressed
Cracking Epigenetic Inheritance: HKU Biologists Discovered the Secrets of How Gene Traits are Passed on - Press Releases - Media - HKU
It all started when single-celled organisms started to form colonies of like-minded individuals. The easiest way to do it was for the two daughter cells of a dividing cell to stick together instead of going their own way. They in turn would have had more daughter cells until they formed large clump of cells, but, unless the cells began to perform distinct functions, there was no advantage to forming clumps like that instead of each cell going its own way and fending for itself. Fortunately, there were no large predators around, otherwise a clump of cells would have made a tasty snack and the whole idea would have been abandoned as too risky by half, and we would be stuck now with a world of single-celled organisms and nothing else.
However, with the trial and error which characterises biological development, some of the cells in the clump began to perform specialist functions. For example, as the clump got larger, specialist cells would have been needed to exchange gasses with the environment or the cells at the centre would have been deprived of oxygen and their waste in the form of carbon dioxide would have accumulated because diffusing across a large mass of cells would be too slow to keep up with production and the supply of oxygen would be too slow to keep up with the demand. The same thing applied to getting nutrients into the center of the clump.
So, the clumps which had specialist cells fared better in the competition for resources than those which were just undifferentiated clumps. In fact, the clumps with specialised cells would probably have eaten the undifferentiated clumps and become predators. And with predators there was pressure for increased specialisation for movement, ingestion and excretion, for more efficient respiration and for reproduction. And predation also produced pressure for more motility, for senses like sight and smell and maybe hearing and as the organisms became more complex so they needed nervous systems to coordinate their activities and process and respond to the stimuli their senses were receiving from their environment and some would have evolved defensive armour such as scales and spikes and hard shells and internal structures like cartilage and bone to give their bodies shape and form and to make their swimming apparatus stiffer and more powerful.
But what they never managed to do was find a different way to produce all the different specialist cells by a different method to that used by their single-celled ancestors, so every cell in their body had the full genome whether they needed it or not, and more often than not, they didn't need most of it. A bone cell doesn't need to do what a nerve cell does, and a nerve cell doesn't need to do what a muscle cell does, and neither muscle nor nerve cells need to make bone, and what else needs to make elbow skin other than an elbow skin cell, except perhaps a scrotum skin cell? Yet they all have the genes for doing everything any one cell needs to do.
So, cue creationism's intelligent [sic] designer who has been designing and modifying all these different clumps of specialised cells but who, for some reason, seems incapable of recognising that its designs are heading for disaster unless it can think up a way to make sure each specialised cell has only the genes it needs. For reasons which no creationist apologist has ever managed to explain, their putative designer always behaves as though it can't undo a bad design and start again but is compelled to try to make the best of what it has muddled through with so far. In every way, creationism’s 'intelligent [sic] designer' behaves just like a mindless process operating without a plan, handicapped by acute amnesia, and constantly surprising itself with a new problem it designed just yesterday.
Just like the eccentric British designer and cartoonist, William Heath Robinson, no solution to a problem can be too complex even if it creates a new problem for which another overly complex solution has to be found. Unlikely objects, designed for a completely different purpose, will be pressed into service; a stepladder will be balanced precariously on top of a piano and an umbrella will be used to push a button when prodded by a sink plunger swinging on a length of knotted string. A labour-saving device for peeling potatoes will take half a dozen, intense and serious-looking men to operate it and peeling the potatoes will take considerably longer than had each man been given a potato peeler and left to get on with it. Eggs will be fried in a frying pan held over a candle lit by a match rubbed against a matchbox which swings into action when released by a lever when the scuttle-full of coal, or the boulder suspended on knotted string, lands on it.
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Covidiot News - Just Because You Haven't Had COVID-19 Yet, Doesn't Mean You Won't!
The SARS-CoV-2 virus needs to attach to receptors to gain access to our cells.
Kateryna Kon/Shutterstock
Haven't had COVID yet? It could be more than just luck
There are some scary questions for creationists at the end of this article. They follow on naturally from what's being discussed, so creationists should probably avoid reading too far, unless they have a responsible adult with them.
This article from The Conversation is from May 2022, when we were into the second year of the COVID-19 pandemic and most vulnerable people had had the two-step vaccinations and many would have had the spring booster. At that point neither me nor my partner had had COVID-19, which we put down to rigorously following the recommendations regarding mask-wearing, social distancing, hand washing, etc. and had tried to reduce our vulnerability to the sever forms of it by losing about 3 stone in weight and, in my case, getting my blood pressure under control with medication. We also tried to ensure our immune systems were healthy by taking vitamin D3, vitamin C, zinc and iron supplements.
In the early days of the pandemic, even before the official restrictions on social contact, we had observed the basic rules of hygiene and everyone who came into the house used hand-cleanser at the front door. I had even managed to obtain a supply of face-masks and plastic gloves online, which we wore at all times outside the house. Every package that was delivered to the house was left for several hours before we touched it, and all our weekly shopping was delivered or bought with click and collect. Delivered bags were left for four hours before unpacking. And we took weekly tests just in case we had it asymptomatically. All that might seem a little over the top now, but we were vindicated as events were to prove.
We put the fact that we hadn't caught it by mid-2022 down to our preventative measures, not to luck or genetics - a view that was vindicated last year when we both came back from a two-week vacation in France with a mild form of COVID-19, despite having had all the boosters on offer. We probably picked it up in a crowded airport or on the plane, where all the social distancing measures had been forgotten and even face masks were no longer worn. We both felt like we had a mild case of flu for a couple of days and after a week we were testing negative. Had we contracted it in Spring 2020, the outcome would probably have been very different as we had no immunity, and both had three of the risk-factors - overweight, high BP and over 70. In addition, my partner had had a mastectomy and was receiving treatment for breast cancer.
One reason you can't ever be sure that you won't catch COVID-19 is because the virus keeps mutating to produce new variants so, even if you were fortunate enough to have natural or acquired immunity to the variants so far, it is quite possible that the next or subsequent variants will have evolved a way round it. The following chart from the UK NHS, shows the rise and fall of the main variants over the course of the pandemic:
But still, a few people managed to stay free from the virus. In the following article, reprinted from The Conversation under a Creative Commons license, Lindsay Broadbent, Research Fellow, School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, explains why. Her article has been reformatted for stylistic consistency:
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Saturday, 9 March 2024
Creationism in Crisis - Geobiologists Discover The Cause of Earth's First Mass Extinctions Event - 550 Million Years Before 'Creation Week'
Impressions of the Ediacaran fossils Dickinsonia (at center) with the smaller anchor shaped Parvancorina (left) in sandstone of the Ediacara Member from the Nilpena Ediacara National Park in South Australia.
Photo: Scott Evans.
Geobiologists shine new light on Earth’s first known mass extinction event 550 million years ago | VTx | Virginia Tech
A big problem for Creationists, especially those who believe the Bible was written by an infallible creator god, so think Earth is just a few thousand years old, is that science keeps finding evidence that Earth is billions of years old, and finding fossils of the life-forms that were around then.
As though that wasn't refutation enough, a team of scientists from Virginia Tech have now explained the mass extinction that wiped out most of these early life forms several billion years ago - giving the lie that they were intelligently designed by a god with the ability of foresight. Such a god would have known about the future mass extinctions and either prevented it, designed his creations to survive it or at least waited till it was safe to create things. Creating things to go extinct is not the act of an intelligent or sane creator.
This mass extinction appears not to have been a sudden event, such as that that resulted in the extinction of the non-avian dinosaurs and large marine reptile predators, but to have occurred in two phases that resulted in a loss of about 80% of species and separated by about 10 million years.
But before creationists get over-excited, this does not mean all the Ediacarans were extinct at the Cambrian 'explosion' so the Cambrian biota had no ancestors. It means that there were still about 20% of the Ediacaran biota to evolve over the 6 million years of the Cambrian 'explosion' into the Cambrian biota.
The Ediacaran mass extinction was probably caused by falling Oxygen levels as Ediacarans that had evolved large mass to surface-area ratios suffered from a loss of oxygen more so than those which had retained a smaller mass to surface area ratio.
How this mass extinction was identified and related to changes in global oxygen levels was the subject of an open access paper in PNAS and a Virginal Tech News item:
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Creationism in Crisis - Earth's Oldest Forest Was In Present-Day Dorset, UK - 390 Million Years Before Creationism's 'Creation Week'
Illustration of Calamophyton trees.
Credit: Peter Giesen/Chris Berry
Earth’s earliest forest revealed in Somerset fossils
Archaeologists have found what are believed to be the remains of the earliest forest so far discovered in Devonian sandstone rocks dated to 390 million years ago, which makes them 4 million years older than the previous record found in New York State, and means they were living almost 390 million years before creationism's 'Creation Week' when their god decided to create a small flat planet with a dome over it, centered on the Middle East.
The fossils were discovered in coastal cliffs near Minehead, Dorset, England in what is known as the Eifelian Hangman Sandstone Formation and consist of primitive trees which were ancestral to today's trees but looked more like palm trees. The discovery is the subject of a paper in the Journal of the Geological Society and a news release from the University of Cambridge, UK.
First a little about this rock formation:
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Creationism in Crisis - How Genomic Imprinting Evolved - Unintelligently
Microscopic fluorescence image of a C.tropicalis mother worm. The worm carries eggs loaded with a toxin (red) which is expressed from a Toxin-Antidote selfish genetic element only when it was maternally inherited.
© Pinelopi Pliota/IMBA
Revealing the evolutionary origin of genomic imprinting
Genomic imprinting is the process by which genes are suppressed by epigenetic settings that differ depending on whether the genes come from the father or the mother in a sexually-reproducing species.
This is an example of the sort of Heath Robinson machine which a natural, mindless evolutionary process can and does produce and which distinguishes evolved systems from intelligently designed processes. It comes from the fact that multicellular organism uses the same method to replicate their cells as their single-celled ancestors used, yet only need a small selection of the genes depending on how specialised the particular cells are.
But the reason for genomic imprinting involves something even more embarrassing to any creationists who understand it - it probably evolved out of an arms race not between the organism and a foreign parasite but between the organism and one of its genes that had gone rogue and turned into a 'jumping' gene or 'selfish genetic element':
What exactly are 'selfish genetic elements' and what do they do? Selfish genetic elements are DNA sequences that have evolved to enhance their own transmission to the next generation, often at the expense of the organism's overall fitness. These elements can manipulate various cellular and reproductive processes to increase their own propagation within a population, sometimes even if it is detrimental to the host organism.In the case of the nematode, Caenorhabditis elegans, this arms race has produced a truly bizarre result, and something only an unintelligent, mindless designer, or a malevolent designer, could come up with, known as toxic ascaris, or TAs:
One well-known example of selfish genetic elements is transposable elements, also known as jumping genes. These DNA sequences have the ability to move or copy themselves within the genome, potentially disrupting genes or regulatory sequences in the process. While transposable elements can sometimes contribute to genetic variation and evolution, they can also cause harmful mutations or genomic instability.
Another example of selfish genetic elements is meiotic drive elements. These elements bias their own transmission during meiosis, the process by which gametes (sperm and eggs) are formed. Meiotic drive can result in the preferential transmission of one allele (variant of a gene) over another, leading to distortions in genetic inheritance patterns within a population.
Selfish genetic elements can have significant implications for evolutionary processes, population genetics, and genome stability. They can influence patterns of genetic diversity, contribute to speciation, and even drive the evolution of complex biological systems. However, they can also pose challenges for organisms by causing genetic disorders or reducing overall reproductive success.
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Friday, 8 March 2024
Creationism in Crisis - Like Humans, Bumblebees Learn Through Social Interaction And May Have Cumulative Culture
Bumblebees teaching each other to solve a complex puzzle
Bees master complex tasks through social interaction - Queen Mary University of London
A sacred Tenet of creationism is that we humans are a special creation by the creator of the universe who made everything just for us. They point to the many 'unique' traits and abilities of humans as evidence of this - the ability to teach and learn, to form cultures, even walking upright are frequently cited as examples. It's also a sacred Tenet of creationism that anything which might refute the sacred tenets of creationism must be ignore, hand-waved aside or misrepresented but never, ever acknowledged for what it is - a refutation of creationism.
So, we can expect one or more of those tactics for handling the cognitive dissonance that news that bumble bees can teach and learn and so have at least the basis for forming cumulative cultures. The news itself comes in the form of an open access research paper in Nature by a team Led by Dr Alice Bridges and Lars Chittka, Professor of Sensory and Behavioural Ecology at Queen Mary University of London.
The team showed that a complex, two-step task, which needed to be performed to receive a reward in the form of a sweet liquid could be learned by bees who were allowed to watch a trained 'demonstrator' perform the task. The bees not only learned how to perform the steps involved but that there was a reward to be had for doing so.
The 'demonstrators' had previously been trained by giving intermediate rewards as each stage was completed successfully, which were eventually withdrawn, leaving only the final reward. The experiment and its significance are explained in a Queen Mary University news release:
Unintelligent Design - New Species Of Deep-Ocean Worm - But What Is It For, Exactly?
Pectinereis strickrotti
[Right caption/credit]
New Deep-Sea Worm Discovered at Methane Seep off Costa Rica | Scripps Institution of Oceanography
One of the hallmarks of good intelligent design is that the designed object must be designed for a purpose. No intelligent designer is going to waste time making something that doesn't have any use. Even a decorative use is a function. As the designer William Morris said, "Have nothing in your house that you do not know to be useful, or believe to be beautiful.", but creationism's designer seems to just design things for the sake of it - half a million different beetles, for example. And now we have the example of a deep-ocean worm that appears to have no other purpose than to make more deep-ocean worms.
It's almost exactly like these different organisms are being designed by a mindless, natural process without a plan and no sense of purpose!
According to creationist superstitions in Genesis, every living thing on Earth was created for the benefit of mankind, and, incidentally, named by Adam (as though Adam would have had enough time to name every living species!). So, a challenge to creationists is to tell us what these deep-ocean worms are for in terms of their utility value for humans, and how did Adam dive that deep to name them?
Its discovery if the subject of an open access paper in PLOS ONE and is described in a Scripps Institute for Oceanography news release:
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Thursday, 7 March 2024
Creationism in Crisis - Evolution of Porcini Fungus
Porcini mushrooms Boletus Edulis
A tale of terroir: Porcinis evolved to the local environment – @theU The edible porcine fungus (Boletus edulis) also known as the boletus or penny bun is highly prized culinary delicacy throughout much of Europe. However, there is something strange about it evolution, especially in North America, according to a new report in the journal New Phytologist.
Creationists should note here that the scientists who produced the report see this 'problem' entirely within the Theory of Evolution by Natural Selection (TOE). The strangeness is not a problem for the theory but an example of how a fundamental principle of the theory - environmental selection - operates in North America.
The 'problem' is that while Boletus edulis exists in North America as a number of different varieties and genetically distinct populations, probably caused not so much by geographical isolation as environmental adaptation, albeit with regular ingress from surrounding populations, In Eurasia, a single genetic lineage dominates from Spain to Georgia to Scandinavia, so the interesting question is why does is the species genetically continuous in Eurasia but fragmented in North America; what is the difference between the two landmasses that causes this difference.
The Eurasian and North American populations are believed to have become separated during a period of climatic change and the onset of glaciation, 1.62–2.66 years ago. Attempts to segregate populations of Boletus edulis into distinct species based on phenotype have foundered on the genetic evidence, illustrating how small genetic differences can give large phenotypic differences and how a species in the process of speciating passes through a stage at which the diverging populations have not diverged sufficiently to qualify as new taxons because the practice of taxonomy tries to fit a continuous process into a series of distinct events.
The 'problem' is the subject of a free access paper in the journal New Phytologist by Keaton Tremble and Bryn T. M. Dentinger from Utah University, Utah, USA. together with J. I. Hoffman from Bielefeld University, Germany, and was described in a University of Utah press release:
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Creationism in Crisis - 500 Million Year-Old Fossils Reveal the Answer to an Evolutionary Riddle
Artist's reconstruction of Gangtoucunia aspera as it would have appeared in life on the Cambrian seafloor, circa 514 million years ago. The individual in the foreground has part of the skeleton removed to show the soft polyp inside the skeleton.
Reconstruction by Xiaodong Wang
500 million year-old fossils reveal answer to evolutionary riddle | EurekAlert!
It must be galling to the leaders of the Creationist cults when science closes yet another gap and casually refutes the misleading claims they have fooled their cult followers with. It's much easier for the frauds to play to the parochial ignorance and childish thinking of their followers who will always assume that if science can't explain something, the locally popular god must have done it, ignoring the false dichotomy fallacy underpinning that deception.
Some of the gaps are artificial, obviously, being created by Creationists from misrepresentations of the actual science, such as claiming there are no transitional fossils showing, for example, a half chimpanzee - half human, but some of them are genuine gaps in the fossil record, although these tend to be ignored by creationist frauds because it would require a detailed knowledge of the evidence to appreciate where the real gaps are, and a detailed knowledge of the evidence is something no Creationist can afford to have.
One such gap, until now, was the early evolution of skeletal animals. The first fossils of skeletal animals appeared in the fossil record 550-520 million years ago during the so-called the Cambrian Explosion, which must be one of the slowest explosions on record, occurring over several tens of millions of years, but nevertheless a period of rapid evolution and diversification into different body-plans in the early history of multicellular organisms.
Many of these early fossils are simple hollow tubes ranging from a few millimetres to many centimetres in length. However, what sort of animals made these skeletons was almost completely unknown, because they lack preservation of the soft parts needed to identify them as belonging to major groups of animals that are still alive today.
Now though, a team of palaeontologist led by Dr Luke A. Parry of the Department of Earth Sciences, University of Oxford, Oxford, UK, Dr Xiaoya Ma and PhD student Guangxu Zhang, of the Institute of Palaeontology, Yunnan University, Kunming, People's Republic of China, and Dr Jakob Vinther from the Schools of Earth Sciences and Biological Sciences, University of Bristol, UK have analysed a collection of exceptionally well preserved fossils from 514 million years ago that include four specimens of Gangtoucunia aspera with soft tissues still intact.
Just to clarify that , soft-tissue term, before Creationist quote miners misrepresent it: fossilised soft tissue is not soft. It simply means the soft tissue was preserved long enough for it to become mineralised, just as bones, shells and teeth become mineralised in fossils of hard tissue. It is not evidence that these fossils are just a few thousand years old, like Creationist fraud claim dinosaur soft tissue fossils are (they are not soft either, by the way).
Before long, we can expect Creationists to either be claiming these 'soft tissues' have been carbon-dated and found to be recent, or that they haven't been carbon-dated because the scientists were afraid they would be found to be recent!
As the Oxford University News release explains:
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Wednesday, 6 March 2024
Creationism in Crisis - Sudden Climate Change Recorded In Marine Mollusc Shells - From 8,400 Years Before Creationism's Global Genocide
Cantabrian Coast, Spain, where prehistoric people collected marine molluscs for food
Marine mollusc shells reveal how prehistoric humans adapted to intense climate change - Universitat Autònoma de Barcelona - UAB Barcelona
In an event known to geologists as the '8.2 Ka event', i.e. 8.2 Kilo anum (thousand years) event, a sudden flow of cold water melt-water from the North American lakes into the North Atlantic stopped the 'Atlantic Conveyer' from bringing warm water from the Gulf of Mexico up to the coast of Western Europe and with it warm, moist air. This even significantly and quite suddenly changed the climate to a colder, drier weather pattern which affected marine wildlife.
That event was subsequently recorded in the shells of the marine molluscs the people living along the Cantabrian Coast of Northern Spain gathered for food, disposing of the shells in midden tips, such as in the El Mazo cave in Asturias, Spain. The 8.2 Ka event also had a profound effect on the human societies as their food disappeared or migrated to more equitable areas.
If the creationists story of a global genocidal flood were true, then this record would have been swept away and destroyed, or at least buried under the predicted layer of silt and dead animal and plant remains that such a flood would have made inevitable. But there it is, looking for all the world like there never was a global flood and not so much as a centimeter of silt covering it.
The midden in the El Mazo cave was in use for about 1500 years, producing a continuous stratigraphic record with a very high chronological resolution, which is now the subject of a paper in Scientific Reports by a team of archaeologists led by Asier García Escárzaga, current researcher from the Institute of Environmental Science and Technology (ICTA-UAB) and the Department of Prehistory of the Universitat Autònoma de Barcelona, together with Igor Gutiérrez Zugasti, from the Universidad de Cantabria (UC). The study was coordinated from the Universidad de La Rioja (UR) and the Max Planck Institute (Germany) alongside members of other academic centres (Max Planck Institute, University of Burgos, Universidad Complutense de Madrid and University of Faro).
The study applies a multidisciplinary toolkit of archaeomalacological studies and stable oxygen isotope analyses to shell remains recovered from the shell midden site.
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Creationism in Crisis - Earliest Toothless Bird From 120 Million Years Ago
Illustration showing the fossil skeleton of Imparavis attenboroughi, alongside a reconstruction of the bird in life.
© Ville Sinkkonen.
Fossil named “Attenborough’s strange bird” was the first of its kind without teeth - Field Museum
It seems every week is a bad week for creationists, yet the wackadoodle cult staggers on, albeit with dwindling numbers, managing as always to ignore anything that shows their childish superstition to be wrong.
On top of the recently-reported predatory marine lizard, from 66 million years ago, we now have the earliest bird without the teeth of its enantiornithine ancestors. The enantiornithines were a diverse class of avian dinosaurs that went extinct 66 million years ago following the meteor impact that killed most of the dinosaurs. Only the ornithuromorphs survived, for reasons not completely understood, and they gave rise to all modern birds.
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